Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 AL354861.1-201ENST00000445213 355 ntBASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 AC007326.1-201ENST00000604539 458 ntBASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBE2OQ9C0C9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
UBE2OQ9C0C9 CICP14-201ENST00000629111 2732 ntBASIC16.27■□□□□ 0.19
UBE2OQ9C0C9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBE2OQ9C0C9 IL9RP3-201ENST00000442856 1674 ntBASIC16.27■□□□□ 0.19
UBE2OQ9C0C9 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
UBE2OQ9C0C9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBE2OQ9C0C9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBE2OQ9C0C9 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 MRPL37P1-201ENST00000592451 1337 ntBASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 MIR557-201ENST00000385239 98 ntBASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 DUTP3-201ENST00000450025 415 ntBASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 CR383656.3-201ENST00000551315 183 ntBASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 DUX4L47-201ENST00000566374 394 ntBASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 SNX18-202ENST00000343017 3140 ntBASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 AC009093.2-202ENST00000620513 2079 ntBASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
UBE2OQ9C0C9 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBE2OQ9C0C9 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms