Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM4Q9C037 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM4Q9C037 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.98□□□□□ -0.01
TRIM4Q9C037 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.98□□□□□ -0.01
TRIM4Q9C037 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.98□□□□□ -0.01
TRIM4Q9C037 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM4Q9C037 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM4Q9C037 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM4Q9C037 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.98□□□□□ -0.01
TRIM4Q9C037 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.98□□□□□ -0.01
TRIM4Q9C037 RN7SL828P-201ENST00000607615 303 ntBASIC14.98□□□□□ -0.01
TRIM4Q9C037 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.98□□□□□ -0.01
TRIM4Q9C037 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM4Q9C037 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM4Q9C037 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM4Q9C037 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM4Q9C037 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM4Q9C037 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM4Q9C037 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM4Q9C037 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM4Q9C037 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRIM4Q9C037 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRIM4Q9C037 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
TRIM4Q9C037 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM4Q9C037 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.98□□□□□ -0.01
TRIM4Q9C037 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM4Q9C037 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM4Q9C037 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.98□□□□□ -0.01
TRIM4Q9C037 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM4Q9C037 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.98□□□□□ -0.01
TRIM4Q9C037 BX640514.1-201ENST00000583223 1918 ntBASIC14.98□□□□□ -0.01
TRIM4Q9C037 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 AC007389.4-201ENST00000454674 793 ntBASIC14.97□□□□□ -0.01
TRIM4Q9C037 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 RN7SL618P-201ENST00000477850 296 ntBASIC14.97□□□□□ -0.01
TRIM4Q9C037 ELK1P1-201ENST00000485699 580 ntBASIC14.97□□□□□ -0.01
TRIM4Q9C037 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 AC044860.1-202ENST00000559481 777 ntBASIC14.97□□□□□ -0.01
TRIM4Q9C037 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM4Q9C037 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
TRIM4Q9C037 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRIM4Q9C037 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM4Q9C037 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM4Q9C037 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM4Q9C037 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRIM4Q9C037 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM4Q9C037 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM4Q9C037 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM4Q9C037 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM4Q9C037 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TRIM4Q9C037 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRIM4Q9C037 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRIM4Q9C037 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM4Q9C037 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRIM4Q9C037 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
TRIM4Q9C037 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM4Q9C037 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM4Q9C037 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM4Q9C037 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms