Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 VENTXP1-201ENST00000569334 2716 ntBASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 HIST3H2BA-201ENST00000436555 524 ntBASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 AC092910.1-201ENST00000482027 1129 ntBASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 UNC93B6-202ENST00000528242 690 ntBASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 SAMD11P1-201ENST00000571429 661 ntBASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 AC074044.1-201ENST00000609673 707 ntBASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 CLK3P2-201ENST00000427566 1453 ntBASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 BCAR1-209ENST00000546196 1340 ntBASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 KHSRPP1-201ENST00000427983 1768 ntBASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 CICP1-201ENST00000416803 2410 ntBASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SEC22CQ9BRL7 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC22CQ9BRL7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.4
SEC22CQ9BRL7 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SEC22CQ9BRL7 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC22CQ9BRL7 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
SEC22CQ9BRL7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC22CQ9BRL7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEC22CQ9BRL7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.55□□□□□ -0.4
SEC22CQ9BRL7 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC22CQ9BRL7 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.55□□□□□ -0.4
SEC22CQ9BRL7 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEC22CQ9BRL7 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.55□□□□□ -0.4
SEC22CQ9BRL7 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEC22CQ9BRL7 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC22CQ9BRL7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms