Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 PYY2-201ENST00000315776 282 ntBASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 SAT1-201ENST00000379251 801 ntTSL 2 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 SAT1-202ENST00000379253 909 ntTSL 2 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 SAT1-203ENST00000379254 868 ntTSL 3 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 BAX-205ENST00000391871 687 ntTSL 5 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 AC234644.1-201ENST00000406065 370 ntBASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 STK16-203ENST00000409516 895 ntTSL 2 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 PPOX-204ENST00000462866 473 ntTSL 5 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 NDUFB10P1-201ENST00000567319 521 ntBASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 AL451007.2-201ENST00000632004 563 ntBASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 AC002472.4-201ENST00000641915 272 ntBASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 LINC00528-201ENST00000600723 2160 ntBASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CRAMP1Q96RY5 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 AQP7P5-201ENST00000428759 1049 ntBASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 AQP7P4-201ENST00000447083 1042 ntBASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 AQP7P2-201ENST00000453967 1041 ntBASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 AC005586.2-201ENST00000563946 837 ntBASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 AC244250.3-201ENST00000620749 366 ntBASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 AQP7P3-201ENST00000624547 1041 ntBASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.75■□□□□ 0.43
CRAMP1Q96RY5 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CRAMP1Q96RY5 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CRAMP1Q96RY5 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CRAMP1Q96RY5 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CRAMP1Q96RY5 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.74■□□□□ 0.43
CRAMP1Q96RY5 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CRAMP1Q96RY5 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms