Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 OR2I1P-209ENST00000641730 5365 ntBASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CSPG4P5Q96PW8 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 CHMP1AP1-201ENST00000445563 662 ntBASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 AC126755.1-201ENST00000525846 6405 ntBASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 KRT8P28-201ENST00000433288 1390 ntBASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSPG4P5Q96PW8 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 AC011498.7-201ENST00000624986 2027 ntBASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 CNN2P10-201ENST00000443067 918 ntBASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 AL355994.2-201ENST00000447882 704 ntBASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 SNX29P1-201ENST00000548357 1007 ntBASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CSPG4P5Q96PW8 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms