Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 AL645933.1-201ENST00000440087 609 ntBASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 AC073352.2-201ENST00000609385 439 ntBASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 AP002414.2-201ENST00000591780 3365 ntBASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
SYNGAP1Q96PV0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 SERF2-206ENST00000409291 807 ntTSL 3 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 FGFR3P1-201ENST00000449999 601 ntBASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 RN7SL555P-201ENST00000584742 339 ntBASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 AC051619.9-201ENST00000623237 597 ntBASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 AC148477.9-201ENST00000623974 539 ntBASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 HLA-C-210ENST00000640219 976 ntBASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 AC144522.1-201ENST00000625111 1658 ntBASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 AC091951.1-201ENST00000512854 2465 ntBASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SYNGAP1Q96PV0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 AC098935.1-201ENST00000446057 611 ntBASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms