Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
COL21A1Q96P44 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL21A1Q96P44 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
COL21A1Q96P44 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL21A1Q96P44 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COL21A1Q96P44 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
COL21A1Q96P44 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL21A1Q96P44 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL21A1Q96P44 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.07□□□□□ -0.16
COL21A1Q96P44 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 AC023090.2-201ENST00000625182 2110 ntBASIC14.06□□□□□ -0.16
COL21A1Q96P44 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 RNU1-114P-201ENST00000365297 166 ntBASIC14.06□□□□□ -0.16
COL21A1Q96P44 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.06□□□□□ -0.16
COL21A1Q96P44 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 KLF2P2-201ENST00000416807 1039 ntBASIC14.06□□□□□ -0.16
COL21A1Q96P44 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 IGHV3-72-202ENST00000621503 303 ntBASIC14.06□□□□□ -0.16
COL21A1Q96P44 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 AC152010.1-201ENST00000415779 2006 ntBASIC14.06□□□□□ -0.16
COL21A1Q96P44 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 PTENP1-202ENST00000532280 3996 ntBASIC14.06□□□□□ -0.16
COL21A1Q96P44 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.06□□□□□ -0.16
COL21A1Q96P44 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL21A1Q96P44 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 BAATP1-201ENST00000412284 1225 ntBASIC14.05□□□□□ -0.16
COL21A1Q96P44 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 GAPDHP21-201ENST00000450301 1010 ntBASIC14.05□□□□□ -0.16
COL21A1Q96P44 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 AC022137.2-201ENST00000503482 481 ntBASIC14.05□□□□□ -0.16
COL21A1Q96P44 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms