Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 AC087045.2-201ENST00000606279 1003 ntBASIC17.32■□□□□ 0.36
TRIM47Q96LD4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 AL136295.7-201ENST00000619226 1200 ntBASIC17.32■□□□□ 0.36
TRIM47Q96LD4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 AC055811.4-201ENST00000624039 1754 ntBASIC17.32■□□□□ 0.36
TRIM47Q96LD4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM47Q96LD4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 RN7SKP214-201ENST00000364208 315 ntBASIC17.31■□□□□ 0.36
TRIM47Q96LD4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.31■□□□□ 0.36
TRIM47Q96LD4 AL627389.1-201ENST00000413508 1182 ntBASIC17.31■□□□□ 0.36
TRIM47Q96LD4 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 KRT18P66-201ENST00000452970 1269 ntBASIC17.31■□□□□ 0.36
TRIM47Q96LD4 RN7SL8P-201ENST00000461771 266 ntBASIC17.31■□□□□ 0.36
TRIM47Q96LD4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 AC009955.4-201ENST00000597192 544 ntBASIC17.31■□□□□ 0.36
TRIM47Q96LD4 AL358472.3-201ENST00000608147 415 ntBASIC17.31■□□□□ 0.36
TRIM47Q96LD4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 AL136301.1-201ENST00000615830 422 ntBASIC17.31■□□□□ 0.36
TRIM47Q96LD4 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 AL603764.1-201ENST00000636452 321 ntBASIC17.31■□□□□ 0.36
TRIM47Q96LD4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM47Q96LD4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 CICP24-201ENST00000605464 2705 ntBASIC17.3■□□□□ 0.36
TRIM47Q96LD4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 AC073150.1-201ENST00000450406 1084 ntBASIC17.3■□□□□ 0.36
TRIM47Q96LD4 RPL18P13-201ENST00000478088 569 ntBASIC17.3■□□□□ 0.36
TRIM47Q96LD4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM47Q96LD4 AC100827.2-201ENST00000563214 1194 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms