Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 TMEM198B-204ENST00000484016 896 ntBASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 AC036164.1-201ENST00000570544 333 ntBASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 BRI3BPP1-201ENST00000594224 787 ntBASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 AC083964.2-201ENST00000623988 2396 ntBASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 AL356585.2-201ENST00000625078 2396 ntBASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 AC072061.1-201ENST00000569710 2234 ntBASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 AC020910.5-201ENST00000623668 1865 ntBASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 AL136172.1-201ENST00000598590 1394 ntBASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 TPRX2P-201ENST00000535362 881 ntBASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 BTBD7P1-201ENST00000447253 1453 ntBASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 AC015688.4-201ENST00000580780 1647 ntBASIC17.18■□□□□ 0.34
CHAMP1Q96JM3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 DOC2GP-202ENST00000514950 1163 ntBASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
CHAMP1Q96JM3 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms