Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 FAM86MP-201ENST00000340703 885 ntBASIC15.28■□□□□ 0.04
CCDC97Q96F63 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC97Q96F63 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC97Q96F63 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC97Q96F63 AC026410.3-201ENST00000514280 936 ntBASIC15.28■□□□□ 0.04
CCDC97Q96F63 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC97Q96F63 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 AC124283.3-201ENST00000570869 594 ntBASIC15.28■□□□□ 0.04
CCDC97Q96F63 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 MIR6775-201ENST00000617557 69 ntBASIC15.28■□□□□ 0.04
CCDC97Q96F63 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC97Q96F63 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC97Q96F63 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC97Q96F63 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC97Q96F63 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC97Q96F63 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC97Q96F63 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC97Q96F63 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 AC007191.1-201ENST00000623179 2995 ntBASIC15.27■□□□□ 0.04
CCDC97Q96F63 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC97Q96F63 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC97Q96F63 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC97Q96F63 REXO1L4P-201ENST00000605109 1937 ntBASIC15.27■□□□□ 0.04
CCDC97Q96F63 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC97Q96F63 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC97Q96F63 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC97Q96F63 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC97Q96F63 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC97Q96F63 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC97Q96F63 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC97Q96F63 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC97Q96F63 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC97Q96F63 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC97Q96F63 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 BTNL10-201ENST00000595971 695 ntBASIC15.27■□□□□ 0.04
CCDC97Q96F63 AC008735.3-201ENST00000596646 500 ntBASIC15.27■□□□□ 0.04
CCDC97Q96F63 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC97Q96F63 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.27■□□□□ 0.04
CCDC97Q96F63 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC97Q96F63 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CCDC97Q96F63 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CCDC97Q96F63 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC97Q96F63 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC97Q96F63 INTS4P2-202ENST00000614726 2019 ntBASIC15.27■□□□□ 0.03
CCDC97Q96F63 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC97Q96F63 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC97Q96F63 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC97Q96F63 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC97Q96F63 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC97Q96F63 REXO1L6P-201ENST00000603433 1515 ntBASIC15.27■□□□□ 0.03
CCDC97Q96F63 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC97Q96F63 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC97Q96F63 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC97Q96F63 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC97Q96F63 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC97Q96F63 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC97Q96F63 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC97Q96F63 AGAP7P-201ENST00000582299 2062 ntBASIC15.26■□□□□ 0.03
CCDC97Q96F63 AGAP14-201ENST00000624701 2060 ntBASIC15.26■□□□□ 0.03
CCDC97Q96F63 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC97Q96F63 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC97Q96F63 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC97Q96F63 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC97Q96F63 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms