Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 AC130686.1-201ENST00000622936 2466 ntBASIC14.3□□□□□ -0.12
VPS33AQ96AX1 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 TSSK5P-201ENST00000423978 907 ntBASIC14.3□□□□□ -0.12
VPS33AQ96AX1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 AC009477.1-201ENST00000452936 217 ntBASIC14.3□□□□□ -0.12
VPS33AQ96AX1 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 FAM86LP-201ENST00000478302 853 ntBASIC14.3□□□□□ -0.12
VPS33AQ96AX1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 AC009407.1-201ENST00000568958 598 ntBASIC14.3□□□□□ -0.12
VPS33AQ96AX1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 SRD5A3P1-201ENST00000603021 949 ntBASIC14.3□□□□□ -0.12
VPS33AQ96AX1 AL158211.3-201ENST00000607385 239 ntBASIC14.3□□□□□ -0.12
VPS33AQ96AX1 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 KRT8P22-201ENST00000562317 1415 ntBASIC14.3□□□□□ -0.12
VPS33AQ96AX1 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.3□□□□□ -0.12
VPS33AQ96AX1 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 VDAC1P7-201ENST00000462417 847 ntBASIC14.29□□□□□ -0.12
VPS33AQ96AX1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 AL049840.4-201ENST00000602422 811 ntBASIC14.29□□□□□ -0.12
VPS33AQ96AX1 AL662799.1-202ENST00000614205 422 ntBASIC14.29□□□□□ -0.12
VPS33AQ96AX1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 AC093028.1-201ENST00000622998 982 ntBASIC14.29□□□□□ -0.12
VPS33AQ96AX1 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.29□□□□□ -0.12
VPS33AQ96AX1 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VPS33AQ96AX1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms