Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 AL591846.1-201ENST00000451736 433 ntBASIC16.66■□□□□ 0.26
TNFRSF25Q93038 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 AC005695.3-201ENST00000614522 232 ntBASIC16.66■□□□□ 0.26
TNFRSF25Q93038 AC022748.3-201ENST00000621828 275 ntBASIC16.66■□□□□ 0.26
TNFRSF25Q93038 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 TUBB1P2-201ENST00000422712 1306 ntBASIC16.66■□□□□ 0.26
TNFRSF25Q93038 TUBB1P1-201ENST00000503144 1300 ntBASIC16.66■□□□□ 0.26
TNFRSF25Q93038 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 VDAC1P1-201ENST00000439229 848 ntBASIC16.65■□□□□ 0.26
TNFRSF25Q93038 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 AC100827.2-201ENST00000563214 1194 ntBASIC16.65■□□□□ 0.26
TNFRSF25Q93038 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 AC005962.1-201ENST00000584100 773 ntBASIC16.65■□□□□ 0.26
TNFRSF25Q93038 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 AL033527.4-201ENST00000641026 673 ntBASIC16.65■□□□□ 0.26
TNFRSF25Q93038 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFRSF25Q93038 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TNFRSF25Q93038 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TNFRSF25Q93038 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.64■□□□□ 0.26
TNFRSF25Q93038 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.64■□□□□ 0.26
TNFRSF25Q93038 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 AC006122.1-201ENST00000493323 440 ntBASIC16.64■□□□□ 0.25
TNFRSF25Q93038 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 AC003686.1-201ENST00000550956 1034 ntBASIC16.64■□□□□ 0.25
TNFRSF25Q93038 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.64■□□□□ 0.25
TNFRSF25Q93038 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 AC144522.1-201ENST00000625111 1658 ntBASIC16.64■□□□□ 0.25
TNFRSF25Q93038 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 MBLAC2-202ENST00000514906 1936 ntBASIC16.64■□□□□ 0.25
TNFRSF25Q93038 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.64■□□□□ 0.25
TNFRSF25Q93038 AL022313.4-201ENST00000562756 2046 ntBASIC16.63■□□□□ 0.25
TNFRSF25Q93038 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms