Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 KRT8P6-201ENST00000399259 1207 ntBASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 PHBP10-201ENST00000416467 784 ntBASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 AC093700.1-201ENST00000503348 717 ntBASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 NF1P11-201ENST00000621292 1282 ntBASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 AC026691.1-201ENST00000602502 2017 ntBASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COL22A1Q8NFW1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 PCDH8P1-201ENST00000428983 2773 ntBASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 SNRPCP15-201ENST00000424055 192 ntBASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 GULOP-201ENST00000454030 748 ntBASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 HCG18-241ENST00000602290 821 ntTSL 2 BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 KF455155.1-201ENST00000604493 303 ntBASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 AC084018.2-201ENST00000613093 2607 ntBASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL22A1Q8NFW1 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 PSME2P2-201ENST00000453033 700 ntBASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 PRR20FP-201ENST00000603320 180 ntBASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 AC087072.1-201ENST00000603727 421 ntBASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 AC254633.1-201ENST00000606790 345 ntBASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 AC106782.5-201ENST00000616011 337 ntBASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 SALL4P6-201ENST00000429385 1691 ntBASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL22A1Q8NFW1 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC18.92■□□□□ 0.62
COL22A1Q8NFW1 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC18.92■□□□□ 0.62
COL22A1Q8NFW1 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL22A1Q8NFW1 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC18.92■□□□□ 0.62
COL22A1Q8NFW1 AC112250.1-201ENST00000504640 745 ntBASIC18.92■□□□□ 0.62
COL22A1Q8NFW1 AP000920.1-201ENST00000531824 344 ntBASIC18.92■□□□□ 0.62
COL22A1Q8NFW1 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC18.92■□□□□ 0.62
COL22A1Q8NFW1 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL22A1Q8NFW1 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC18.92■□□□□ 0.62
COL22A1Q8NFW1 AL450487.2-201ENST00000615934 407 ntBASIC18.92■□□□□ 0.62
COL22A1Q8NFW1 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL22A1Q8NFW1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL22A1Q8NFW1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL22A1Q8NFW1 TMBIM7P-203ENST00000641617 1718 ntBASIC18.92■□□□□ 0.62
COL22A1Q8NFW1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL22A1Q8NFW1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 1882.6 ms