Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 AC090505.1-201ENST00000430515 1834 ntBASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 OR2A1-AS1-210ENST00000496968 531 ntBASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 TRMT112P3-201ENST00000580149 358 ntBASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 AP005212.2-201ENST00000584979 510 ntBASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 AC007250.1-201ENST00000608934 338 ntBASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 MIR6816-201ENST00000620368 66 ntBASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC22.46■■□□□ 1.19
CFAP43Q8NDM7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
CFAP43Q8NDM7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 AC215219.1-201ENST00000400706 1817 ntBASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 OR5BD1P-201ENST00000532527 817 ntBASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 AC005586.2-201ENST00000563946 837 ntBASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 ST5-261ENST00000626808 1071 ntTSL 5 BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CFAP43Q8NDM7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 WARS-203ENST00000358655 2466 ntTSL 2 BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 BRD7P5-201ENST00000299197 1822 ntBASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
CFAP43Q8NDM7 CICP24-201ENST00000605464 2705 ntBASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 MIR566-201ENST00000385187 94 ntBASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 RPL18AP8-201ENST00000486071 528 ntBASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 AL591471.1-201ENST00000621855 229 ntBASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 AC008741.2-201ENST00000612792 3115 ntBASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP43Q8NDM7 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms