Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 LBH-202ENST00000401506 485 ntTSL 3 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 AL355334.1-201ENST00000417713 215 ntBASIC15□□□□□ -0.01
SYNPOQ8N3V7 RPS9P1-201ENST00000419943 583 ntBASIC15□□□□□ -0.01
SYNPOQ8N3V7 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 CICP12-201ENST00000455801 843 ntBASIC15□□□□□ -0.01
SYNPOQ8N3V7 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 AP002803.1-201ENST00000528836 498 ntBASIC15□□□□□ -0.01
SYNPOQ8N3V7 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 AL157813.1-201ENST00000612996 587 ntBASIC15□□□□□ -0.01
SYNPOQ8N3V7 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 AC133540.1-201ENST00000620845 1019 ntBASIC15□□□□□ -0.01
SYNPOQ8N3V7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 CICP11-201ENST00000434745 2827 ntBASIC15□□□□□ -0.01
SYNPOQ8N3V7 AC009090.5-201ENST00000624886 2285 ntBASIC15□□□□□ -0.01
SYNPOQ8N3V7 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SYNPOQ8N3V7 AC144522.1-201ENST00000625111 1658 ntBASIC15□□□□□ -0.01
SYNPOQ8N3V7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15□□□□□ -0.01
SYNPOQ8N3V7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 C18orf15-201ENST00000623680 2534 ntBASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 AC006122.1-201ENST00000493323 440 ntBASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 AC135983.4-201ENST00000564116 1262 ntBASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SYNPOQ8N3V7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 ZBED1P1-201ENST00000502364 1930 ntBASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 AC114501.1-201ENST00000445949 172 ntBASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms