Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 AL354702.1-201ENST00000442006 1960 ntBASIC19.8■□□□□ 0.76
XRN1Q8IZH2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 AC018442.1-201ENST00000421439 2061 ntBASIC19.8■□□□□ 0.76
XRN1Q8IZH2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC19.8■□□□□ 0.76
XRN1Q8IZH2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 ASS1P2-201ENST00000439895 1223 ntBASIC19.79■□□□□ 0.76
XRN1Q8IZH2 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 PRMT1P1-201ENST00000604252 1009 ntBASIC19.79■□□□□ 0.76
XRN1Q8IZH2 AC004686.1-201ENST00000605113 538 ntBASIC19.79■□□□□ 0.76
XRN1Q8IZH2 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 MYADML-201ENST00000474610 2147 ntBASIC19.79■□□□□ 0.76
XRN1Q8IZH2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 SOD2-205ENST00000444946 917 ntTSL 2 BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 AL359219.1-201ENST00000556311 934 ntBASIC19.79■□□□□ 0.76
XRN1Q8IZH2 HNRNPA1P5-201ENST00000558213 966 ntBASIC19.79■□□□□ 0.76
XRN1Q8IZH2 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC19.79■□□□□ 0.76
XRN1Q8IZH2 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC19.79■□□□□ 0.76
XRN1Q8IZH2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 AL157823.1-201ENST00000403727 628 ntBASIC19.78■□□□□ 0.76
XRN1Q8IZH2 AC136604.1-202ENST00000425471 771 ntBASIC19.78■□□□□ 0.76
XRN1Q8IZH2 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 GALP-202ENST00000440823 889 ntTSL 5 BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 AC023906.1-201ENST00000486386 453 ntBASIC19.78■□□□□ 0.76
XRN1Q8IZH2 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC19.78■□□□□ 0.76
XRN1Q8IZH2 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC19.78■□□□□ 0.76
XRN1Q8IZH2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.78■□□□□ 0.76
XRN1Q8IZH2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
XRN1Q8IZH2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms