Protein–RNA interactions for Protein: Q8IZA3

H1FOO, Histone H1oo, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1FOOQ8IZA3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 AL136172.1-201ENST00000598590 1394 ntBASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 AC011840.2-201ENST00000563063 1520 ntBASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 SPDYE19P-201ENST00000338590 713 ntBASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 C1QBPP1-201ENST00000400117 770 ntBASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 GIMAP3P-201ENST00000495150 836 ntBASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 AP001582.1-201ENST00000525856 295 ntBASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
H1FOOQ8IZA3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
H1FOOQ8IZA3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.43
H1FOOQ8IZA3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
H1FOOQ8IZA3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
H1FOOQ8IZA3 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
H1FOOQ8IZA3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 AC089987.1-201ENST00000551654 2209 ntBASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 KLF2P2-201ENST00000416807 1039 ntBASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 EIF3FP3-201ENST00000434851 1086 ntBASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.33□□□□□ -0.44
H1FOOQ8IZA3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms