Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 MIR557-201ENST00000385239 98 ntBASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 RPL7P35-201ENST00000446943 740 ntBASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 RNA5SP359-201ENST00000364838 113 ntBASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 NDUFS6P1-201ENST00000485187 316 ntBASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 DNM1P30-201ENST00000563586 452 ntBASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 AP001065.2-201ENST00000617205 644 ntBASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS3Q8IXF0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS3Q8IXF0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS3Q8IXF0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
NPAS3Q8IXF0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms