Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 TPRX2P-201ENST00000535362 881 ntBASIC13.26□□□□□ -0.29
LRRC28Q86X40 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LRRC28Q86X40 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRRC28Q86X40 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 AL354702.1-201ENST00000442006 1960 ntBASIC13.25□□□□□ -0.29
LRRC28Q86X40 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 AC004945.1-201ENST00000416738 983 ntBASIC13.25□□□□□ -0.29
LRRC28Q86X40 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 RPL13P2-201ENST00000440687 659 ntBASIC13.25□□□□□ -0.29
LRRC28Q86X40 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 API5-211ENST00000534695 560 ntTSL 5 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 AL358472.5-202ENST00000641448 1267 ntBASIC13.25□□□□□ -0.29
LRRC28Q86X40 AF228730.6-201ENST00000641497 218 ntBASIC13.25□□□□□ -0.29
LRRC28Q86X40 AC084121.3-201ENST00000641716 218 ntBASIC13.25□□□□□ -0.29
LRRC28Q86X40 AC105233.6-201ENST00000642093 218 ntBASIC13.25□□□□□ -0.29
LRRC28Q86X40 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LRRC28Q86X40 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRC28Q86X40 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms