Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC009407.1-201ENST00000568958 598 ntBASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 AF228730.6-201ENST00000641497 218 ntBASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 AC084121.3-201ENST00000641716 218 ntBASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 AC130686.1-201ENST00000622936 2466 ntBASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMEM53Q6P2H8 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 AC008738.7-201ENST00000609744 511 ntBASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 AJ011932.1-201ENST00000621707 465 ntBASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM53Q6P2H8 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.22
TMEM53Q6P2H8 AC004899.2-201ENST00000622993 3860 ntBASIC13.71□□□□□ -0.22
TMEM53Q6P2H8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
TMEM53Q6P2H8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TMEM53Q6P2H8 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.71□□□□□ -0.22
TMEM53Q6P2H8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TMEM53Q6P2H8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.71□□□□□ -0.22
TMEM53Q6P2H8 AC004241.5-201ENST00000623870 2448 ntBASIC13.71□□□□□ -0.22
TMEM53Q6P2H8 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.71□□□□□ -0.22
TMEM53Q6P2H8 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TMEM53Q6P2H8 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TMEM53Q6P2H8 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.71□□□□□ -0.22
TMEM53Q6P2H8 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
TMEM53Q6P2H8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.71□□□□□ -0.22
TMEM53Q6P2H8 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 AC138969.3-201ENST00000546612 1459 ntBASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 AC138932.2-201ENST00000548268 1459 ntBASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 AC126755.4-201ENST00000549796 1459 ntBASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 TOMM22P5-201ENST00000416399 439 ntBASIC13.7□□□□□ -0.22
TMEM53Q6P2H8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms