Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 RN7SKP109-201ENST00000410592 316 ntBASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 ERP29P1-201ENST00000442902 706 ntBASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 RNA5SP417-201ENST00000516459 108 ntBASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 AL365203.3-201ENST00000609742 2057 ntBASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 TEKT4P2-202ENST00000559466 1312 ntBASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 HYMAI-201ENST00000635591 3347 ntBASIC14.35□□□□□ -0.11
LYSMD4Q5XG99 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 AL118508.1-201ENST00000613502 2345 ntBASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 AL357563.1-201ENST00000404728 395 ntBASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 RPL18AP8-201ENST00000486071 528 ntBASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 AC027237.1-201ENST00000560942 655 ntBASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD4Q5XG99 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.33□□□□□ -0.11
LYSMD4Q5XG99 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LYSMD4Q5XG99 AC139712.1-201ENST00000378256 1875 ntBASIC14.33□□□□□ -0.11
LYSMD4Q5XG99 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
LYSMD4Q5XG99 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.33□□□□□ -0.11
LYSMD4Q5XG99 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
LYSMD4Q5XG99 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
LYSMD4Q5XG99 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.33□□□□□ -0.11
LYSMD4Q5XG99 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms