Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CLDN12P56749 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDN12P56749 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDN12P56749 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDN12P56749 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CLDN12P56749 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CLDN12P56749 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.94□□□□□ -0.34
CLDN12P56749 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.94□□□□□ -0.34
CLDN12P56749 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDN12P56749 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.94□□□□□ -0.34
CLDN12P56749 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
CLDN12P56749 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.94□□□□□ -0.34
CLDN12P56749 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.94□□□□□ -0.34
CLDN12P56749 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.94□□□□□ -0.34
CLDN12P56749 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CLDN12P56749 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CLDN12P56749 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CLDN12P56749 AC009093.7-201ENST00000623853 1223 ntBASIC12.94□□□□□ -0.34
CLDN12P56749 AC004461.2-201ENST00000629517 803 ntBASIC12.94□□□□□ -0.34
CLDN12P56749 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CLDN12P56749 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.94□□□□□ -0.34
CLDN12P56749 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CLDN12P56749 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.94□□□□□ -0.34
CLDN12P56749 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
CLDN12P56749 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CLDN12P56749 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CLDN12P56749 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
CLDN12P56749 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CLDN12P56749 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CLDN12P56749 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CLDN12P56749 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLDN12P56749 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.93□□□□□ -0.34
CLDN12P56749 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
CLDN12P56749 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDN12P56749 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDN12P56749 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDN12P56749 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDN12P56749 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CLDN12P56749 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.93□□□□□ -0.34
CLDN12P56749 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 SPDYE7P-202ENST00000420373 878 ntBASIC12.93□□□□□ -0.34
CLDN12P56749 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.93□□□□□ -0.34
CLDN12P56749 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.93□□□□□ -0.34
CLDN12P56749 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDN12P56749 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.93□□□□□ -0.34
CLDN12P56749 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDN12P56749 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.93□□□□□ -0.34
CLDN12P56749 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.93□□□□□ -0.34
CLDN12P56749 TEX28P1-201ENST00000613479 1221 ntBASIC12.93□□□□□ -0.34
CLDN12P56749 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 TEX28P2-201ENST00000617764 1221 ntBASIC12.93□□□□□ -0.34
CLDN12P56749 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CLDN12P56749 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.93□□□□□ -0.34
CLDN12P56749 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.93□□□□□ -0.34
CLDN12P56749 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.93□□□□□ -0.34
CLDN12P56749 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.93□□□□□ -0.34
CLDN12P56749 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CLDN12P56749 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CLDN12P56749 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CLDN12P56749 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CLDN12P56749 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.93□□□□□ -0.34
CLDN12P56749 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms