Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH12P55289 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH12P55289 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.87□□□□□ -0.19
CDH12P55289 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.87□□□□□ -0.19
CDH12P55289 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CDH12P55289 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH12P55289 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
CDH12P55289 KRT8P14-201ENST00000414254 1442 ntBASIC13.87□□□□□ -0.19
CDH12P55289 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH12P55289 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH12P55289 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH12P55289 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CDH12P55289 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.86□□□□□ -0.19
CDH12P55289 AC107918.4-201ENST00000641966 3141 ntBASIC13.86□□□□□ -0.19
CDH12P55289 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH12P55289 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CDH12P55289 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CDH12P55289 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CDH12P55289 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.86□□□□□ -0.19
CDH12P55289 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 DMBT1P1-203ENST00000636837 4628 ntBASIC13.86□□□□□ -0.19
CDH12P55289 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.86□□□□□ -0.19
CDH12P55289 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CDH12P55289 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CDH12P55289 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CDH12P55289 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CDH12P55289 AL645937.2-201ENST00000396808 931 ntBASIC13.86□□□□□ -0.19
CDH12P55289 MEP1AP4-201ENST00000423244 1087 ntBASIC13.86□□□□□ -0.19
CDH12P55289 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.86□□□□□ -0.19
CDH12P55289 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.86□□□□□ -0.19
CDH12P55289 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 RPL13AP25-201ENST00000484130 612 ntBASIC13.86□□□□□ -0.19
CDH12P55289 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.86□□□□□ -0.19
CDH12P55289 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.86□□□□□ -0.19
CDH12P55289 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.86□□□□□ -0.19
CDH12P55289 RFPL4AP1-201ENST00000530883 850 ntBASIC13.86□□□□□ -0.19
CDH12P55289 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.86□□□□□ -0.19
CDH12P55289 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.86□□□□□ -0.19
CDH12P55289 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CDH12P55289 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CDH12P55289 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.86□□□□□ -0.19
CDH12P55289 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CDH12P55289 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CDH12P55289 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CDH12P55289 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH12P55289 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH12P55289 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.86□□□□□ -0.19
CDH12P55289 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH12P55289 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CDH12P55289 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CDH12P55289 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CDH12P55289 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CDH12P55289 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CDH12P55289 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH12P55289 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
CDH12P55289 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH12P55289 AC090505.1-201ENST00000430515 1834 ntBASIC13.85□□□□□ -0.19
CDH12P55289 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CDH12P55289 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms