Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.94□□□□□ -0.34
ATP1B3P54709 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.94□□□□□ -0.34
ATP1B3P54709 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
ATP1B3P54709 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.94□□□□□ -0.34
ATP1B3P54709 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ATP1B3P54709 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ATP1B3P54709 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATP1B3P54709 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.93□□□□□ -0.34
ATP1B3P54709 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.93□□□□□ -0.34
ATP1B3P54709 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
ATP1B3P54709 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.93□□□□□ -0.34
ATP1B3P54709 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ATP1B3P54709 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.93□□□□□ -0.34
ATP1B3P54709 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.93□□□□□ -0.34
ATP1B3P54709 TPT1P11-201ENST00000458482 498 ntBASIC12.93□□□□□ -0.34
ATP1B3P54709 AC093004.1-201ENST00000508850 424 ntBASIC12.93□□□□□ -0.34
ATP1B3P54709 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.93□□□□□ -0.34
ATP1B3P54709 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 AC055876.2-201ENST00000531834 546 ntBASIC12.93□□□□□ -0.34
ATP1B3P54709 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.93□□□□□ -0.34
ATP1B3P54709 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.93□□□□□ -0.34
ATP1B3P54709 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.93□□□□□ -0.34
ATP1B3P54709 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.93□□□□□ -0.34
ATP1B3P54709 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.93□□□□□ -0.34
ATP1B3P54709 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
ATP1B3P54709 BRI3BPP1-201ENST00000594224 787 ntBASIC12.93□□□□□ -0.34
ATP1B3P54709 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 MST1P2-201ENST00000457982 2291 ntBASIC12.93□□□□□ -0.34
ATP1B3P54709 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
ATP1B3P54709 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ATP1B3P54709 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.93□□□□□ -0.34
ATP1B3P54709 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.93□□□□□ -0.34
ATP1B3P54709 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 INTS4P2-202ENST00000614726 2019 ntBASIC12.93□□□□□ -0.34
ATP1B3P54709 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ATP1B3P54709 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ATP1B3P54709 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ATP1B3P54709 AC023090.2-201ENST00000625182 2110 ntBASIC12.92□□□□□ -0.34
ATP1B3P54709 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ATP1B3P54709 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.92□□□□□ -0.34
ATP1B3P54709 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.92□□□□□ -0.34
ATP1B3P54709 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
ATP1B3P54709 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ATP1B3P54709 AL356585.2-201ENST00000625078 2396 ntBASIC12.92□□□□□ -0.34
ATP1B3P54709 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
ATP1B3P54709 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 AL139094.1-201ENST00000405549 1188 ntBASIC12.92□□□□□ -0.34
ATP1B3P54709 MRPS18AP1-201ENST00000414458 589 ntBASIC12.92□□□□□ -0.34
ATP1B3P54709 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.92□□□□□ -0.34
ATP1B3P54709 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.92□□□□□ -0.34
ATP1B3P54709 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.92□□□□□ -0.34
ATP1B3P54709 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
ATP1B3P54709 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.92□□□□□ -0.34
ATP1B3P54709 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.92□□□□□ -0.34
ATP1B3P54709 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATP1B3P54709 RNA5SP421-201ENST00000516864 134 ntBASIC12.92□□□□□ -0.34
ATP1B3P54709 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.92□□□□□ -0.34
ATP1B3P54709 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.92□□□□□ -0.34
ATP1B3P54709 AC120045.2-201ENST00000567334 178 ntBASIC12.92□□□□□ -0.34
ATP1B3P54709 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.92□□□□□ -0.34
ATP1B3P54709 AC005562.1-201ENST00000583030 3219 ntBASIC12.92□□□□□ -0.34
ATP1B3P54709 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.92□□□□□ -0.34
ATP1B3P54709 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.92□□□□□ -0.34
ATP1B3P54709 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms