Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.87□□□□□ -0.35
EFNB2P52799 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
EFNB2P52799 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
EFNB2P52799 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.87□□□□□ -0.35
EFNB2P52799 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.87□□□□□ -0.35
EFNB2P52799 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
EFNB2P52799 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.87□□□□□ -0.35
EFNB2P52799 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.87□□□□□ -0.35
EFNB2P52799 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.87□□□□□ -0.35
EFNB2P52799 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 AC087499.5-201ENST00000452760 1342 ntBASIC12.87□□□□□ -0.35
EFNB2P52799 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB2P52799 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
EFNB2P52799 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.86□□□□□ -0.35
EFNB2P52799 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.86□□□□□ -0.35
EFNB2P52799 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.86□□□□□ -0.35
EFNB2P52799 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
EFNB2P52799 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.86□□□□□ -0.35
EFNB2P52799 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.86□□□□□ -0.35
EFNB2P52799 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.86□□□□□ -0.35
EFNB2P52799 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.86□□□□□ -0.35
EFNB2P52799 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.86□□□□□ -0.35
EFNB2P52799 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
EFNB2P52799 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.86□□□□□ -0.35
EFNB2P52799 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.86□□□□□ -0.35
EFNB2P52799 AC027307.3-201ENST00000594262 1100 ntBASIC12.86□□□□□ -0.35
EFNB2P52799 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.86□□□□□ -0.35
EFNB2P52799 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
EFNB2P52799 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.86□□□□□ -0.35
EFNB2P52799 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
EFNB2P52799 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
EFNB2P52799 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.86□□□□□ -0.35
EFNB2P52799 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
EFNB2P52799 AC093525.8-201ENST00000624099 1342 ntBASIC12.86□□□□□ -0.35
EFNB2P52799 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
EFNB2P52799 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
EFNB2P52799 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB2P52799 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
EFNB2P52799 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB2P52799 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB2P52799 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB2P52799 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB2P52799 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
EFNB2P52799 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB2P52799 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.85□□□□□ -0.35
EFNB2P52799 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB2P52799 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB2P52799 AC111170.3-201ENST00000624282 2464 ntBASIC12.85□□□□□ -0.35
EFNB2P52799 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
EFNB2P52799 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB2P52799 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.85□□□□□ -0.35
EFNB2P52799 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
EFNB2P52799 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
EFNB2P52799 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
EFNB2P52799 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB2P52799 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB2P52799 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.85□□□□□ -0.35
EFNB2P52799 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB2P52799 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.85□□□□□ -0.35
EFNB2P52799 AC015818.8-201ENST00000587907 1519 ntBASIC12.85□□□□□ -0.35
EFNB2P52799 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB2P52799 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB2P52799 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.85□□□□□ -0.35
EFNB2P52799 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.85□□□□□ -0.35
EFNB2P52799 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.85□□□□□ -0.35
EFNB2P52799 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB2P52799 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.85□□□□□ -0.35
EFNB2P52799 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB2P52799 RN7SL618P-201ENST00000477850 296 ntBASIC12.85□□□□□ -0.35
EFNB2P52799 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.85□□□□□ -0.35
EFNB2P52799 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms