Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.86□□□□□ -0.19
RNF144AP50876 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.86□□□□□ -0.19
RNF144AP50876 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 EMC4-208ENST00000559078 599 ntTSL 3 BASIC13.86□□□□□ -0.19
RNF144AP50876 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.86□□□□□ -0.19
RNF144AP50876 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.86□□□□□ -0.19
RNF144AP50876 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RNF144AP50876 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.86□□□□□ -0.19
RNF144AP50876 MIR3197-201ENST00000582241 73 ntBASIC13.86□□□□□ -0.19
RNF144AP50876 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.86□□□□□ -0.19
RNF144AP50876 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.86□□□□□ -0.19
RNF144AP50876 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 AP005019.2-201ENST00000615104 511 ntBASIC13.86□□□□□ -0.19
RNF144AP50876 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC13.86□□□□□ -0.19
RNF144AP50876 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.86□□□□□ -0.19
RNF144AP50876 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RNF144AP50876 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RNF144AP50876 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.86□□□□□ -0.19
RNF144AP50876 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RNF144AP50876 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.86□□□□□ -0.19
RNF144AP50876 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RNF144AP50876 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.86□□□□□ -0.19
RNF144AP50876 BX640514.1-201ENST00000583223 1918 ntBASIC13.86□□□□□ -0.19
RNF144AP50876 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNF144AP50876 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.85□□□□□ -0.19
RNF144AP50876 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RNF144AP50876 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
RNF144AP50876 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.85□□□□□ -0.19
RNF144AP50876 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RNF144AP50876 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.85□□□□□ -0.19
RNF144AP50876 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RNF144AP50876 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.85□□□□□ -0.19
RNF144AP50876 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 AL035633.1-201ENST00000406139 838 ntBASIC13.85□□□□□ -0.19
RNF144AP50876 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.85□□□□□ -0.19
RNF144AP50876 BCRP2-202ENST00000447763 634 ntBASIC13.85□□□□□ -0.19
RNF144AP50876 AC114812.1-204ENST00000449669 728 ntBASIC13.85□□□□□ -0.19
RNF144AP50876 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.85□□□□□ -0.19
RNF144AP50876 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.85□□□□□ -0.19
RNF144AP50876 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
RNF144AP50876 KRT18P25-201ENST00000508931 1278 ntBASIC13.85□□□□□ -0.19
RNF144AP50876 BCRP6-201ENST00000510112 632 ntBASIC13.85□□□□□ -0.19
RNF144AP50876 BCRP7-201ENST00000511549 544 ntBASIC13.85□□□□□ -0.19
RNF144AP50876 ENPP7P5-201ENST00000541031 1031 ntBASIC13.85□□□□□ -0.19
RNF144AP50876 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.85□□□□□ -0.19
RNF144AP50876 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 AL596325.1-201ENST00000563991 1082 ntBASIC13.85□□□□□ -0.19
RNF144AP50876 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.85□□□□□ -0.19
RNF144AP50876 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.85□□□□□ -0.19
RNF144AP50876 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.85□□□□□ -0.19
RNF144AP50876 AC145423.3-201ENST00000615987 467 ntBASIC13.85□□□□□ -0.19
RNF144AP50876 IGHV3-72-202ENST00000621503 303 ntBASIC13.85□□□□□ -0.19
RNF144AP50876 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC13.85□□□□□ -0.19
RNF144AP50876 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC13.85□□□□□ -0.19
RNF144AP50876 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.85□□□□□ -0.19
RNF144AP50876 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RNF144AP50876 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
RNF144AP50876 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RNF144AP50876 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
RNF144AP50876 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF144AP50876 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RNF144AP50876 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RNF144AP50876 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.84□□□□□ -0.19
RNF144AP50876 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF144AP50876 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.84□□□□□ -0.19
RNF144AP50876 AC006504.5-208ENST00000588784 2401 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms