Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM23P36406 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM23P36406 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM23P36406 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM23P36406 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM23P36406 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM23P36406 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM23P36406 AC008805.1-201ENST00000590892 364 ntBASIC14.53□□□□□ -0.08
TRIM23P36406 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
TRIM23P36406 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM23P36406 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRIM23P36406 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRIM23P36406 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM23P36406 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.53□□□□□ -0.08
TRIM23P36406 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM23P36406 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TRIM23P36406 KHSRPP1-201ENST00000427983 1768 ntBASIC14.52□□□□□ -0.08
TRIM23P36406 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.52□□□□□ -0.08
TRIM23P36406 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM23P36406 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM23P36406 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.52□□□□□ -0.08
TRIM23P36406 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM23P36406 TMBIM7P-202ENST00000641474 1516 ntBASIC14.52□□□□□ -0.08
TRIM23P36406 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM23P36406 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM23P36406 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM23P36406 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM23P36406 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM23P36406 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM23P36406 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TRIM23P36406 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM23P36406 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.52□□□□□ -0.09
TRIM23P36406 CYP46A4P-201ENST00000414953 267 ntBASIC14.52□□□□□ -0.09
TRIM23P36406 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.52□□□□□ -0.09
TRIM23P36406 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.52□□□□□ -0.09
TRIM23P36406 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM23P36406 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.52□□□□□ -0.09
TRIM23P36406 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM23P36406 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.52□□□□□ -0.09
TRIM23P36406 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.52□□□□□ -0.09
TRIM23P36406 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.52□□□□□ -0.09
TRIM23P36406 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.52□□□□□ -0.09
TRIM23P36406 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.52□□□□□ -0.09
TRIM23P36406 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRIM23P36406 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM23P36406 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM23P36406 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRIM23P36406 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM23P36406 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.52□□□□□ -0.09
TRIM23P36406 AC067930.6-201ENST00000623257 4947 ntBASIC14.52□□□□□ -0.09
TRIM23P36406 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM23P36406 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM23P36406 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM23P36406 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.52□□□□□ -0.09
TRIM23P36406 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM23P36406 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TRIM23P36406 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.52□□□□□ -0.09
TRIM23P36406 FGD5P1-202ENST00000614866 2498 ntBASIC14.52□□□□□ -0.09
TRIM23P36406 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM23P36406 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRIM23P36406 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.52□□□□□ -0.09
TRIM23P36406 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.52□□□□□ -0.09
TRIM23P36406 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM23P36406 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.52□□□□□ -0.09
TRIM23P36406 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM23P36406 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRIM23P36406 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRIM23P36406 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.51□□□□□ -0.09
TRIM23P36406 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TRIM23P36406 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 AC104581.4-201ENST00000623126 3052 ntBASIC14.51□□□□□ -0.09
TRIM23P36406 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.51□□□□□ -0.09
TRIM23P36406 AC006504.5-208ENST00000588784 2401 ntBASIC14.51□□□□□ -0.09
TRIM23P36406 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRIM23P36406 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.51□□□□□ -0.09
TRIM23P36406 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TRIM23P36406 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 SPTLC1P5-201ENST00000450718 252 ntBASIC14.51□□□□□ -0.09
TRIM23P36406 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM23P36406 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms