Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.66□□□□□ -0.22
ABCD3P28288 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.66□□□□□ -0.22
ABCD3P28288 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.66□□□□□ -0.22
ABCD3P28288 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ABCD3P28288 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ABCD3P28288 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ABCD3P28288 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ABCD3P28288 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
ABCD3P28288 AL354702.1-201ENST00000442006 1960 ntBASIC13.65□□□□□ -0.22
ABCD3P28288 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ABCD3P28288 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.65□□□□□ -0.22
ABCD3P28288 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ABCD3P28288 SHC1P1-201ENST00000425230 1745 ntBASIC13.65□□□□□ -0.22
ABCD3P28288 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ABCD3P28288 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.65□□□□□ -0.22
ABCD3P28288 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
ABCD3P28288 AC010141.1-201ENST00000411585 623 ntBASIC13.65□□□□□ -0.22
ABCD3P28288 MTX1P1-201ENST00000440904 838 ntBASIC13.65□□□□□ -0.22
ABCD3P28288 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ABCD3P28288 AC100850.1-201ENST00000506768 649 ntBASIC13.65□□□□□ -0.22
ABCD3P28288 FAM86HP-204ENST00000513466 959 ntBASIC13.65□□□□□ -0.22
ABCD3P28288 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ABCD3P28288 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ABCD3P28288 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.65□□□□□ -0.22
ABCD3P28288 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.65□□□□□ -0.22
ABCD3P28288 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.65□□□□□ -0.22
ABCD3P28288 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.65□□□□□ -0.22
ABCD3P28288 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.65□□□□□ -0.22
ABCD3P28288 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.65□□□□□ -0.22
ABCD3P28288 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.65□□□□□ -0.22
ABCD3P28288 AC008825.2-201ENST00000603374 718 ntBASIC13.65□□□□□ -0.22
ABCD3P28288 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ABCD3P28288 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.65□□□□□ -0.22
ABCD3P28288 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ABCD3P28288 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ABCD3P28288 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ABCD3P28288 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ABCD3P28288 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
ABCD3P28288 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ABCD3P28288 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ABCD3P28288 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ABCD3P28288 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
ABCD3P28288 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
ABCD3P28288 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 AC023908.3-201ENST00000564211 3047 ntBASIC13.64□□□□□ -0.23
ABCD3P28288 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ABCD3P28288 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 AL137784.3-201ENST00000623858 2288 ntBASIC13.64□□□□□ -0.23
ABCD3P28288 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.64□□□□□ -0.23
ABCD3P28288 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.64□□□□□ -0.23
ABCD3P28288 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.64□□□□□ -0.23
ABCD3P28288 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.64□□□□□ -0.23
ABCD3P28288 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.64□□□□□ -0.23
ABCD3P28288 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ABCD3P28288 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.64□□□□□ -0.23
ABCD3P28288 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.64□□□□□ -0.23
ABCD3P28288 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.64□□□□□ -0.23
ABCD3P28288 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.64□□□□□ -0.23
ABCD3P28288 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.64□□□□□ -0.23
ABCD3P28288 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.64□□□□□ -0.23
ABCD3P28288 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.64□□□□□ -0.23
ABCD3P28288 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
ABCD3P28288 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.64□□□□□ -0.23
ABCD3P28288 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.64□□□□□ -0.23
ABCD3P28288 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.64□□□□□ -0.23
ABCD3P28288 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.64□□□□□ -0.23
ABCD3P28288 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.64□□□□□ -0.23
ABCD3P28288 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
ABCD3P28288 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.64□□□□□ -0.23
ABCD3P28288 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 AC113367.3-201ENST00000508316 1912 ntBASIC13.64□□□□□ -0.23
ABCD3P28288 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
ABCD3P28288 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
ABCD3P28288 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.64□□□□□ -0.23
ABCD3P28288 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ABCD3P28288 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 365.6 ms