Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.74□□□□□ -0.37
CD40P25942 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CD40P25942 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CD40P25942 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 TUBBP5-203ENST00000508529 1334 ntBASIC12.74□□□□□ -0.37
CD40P25942 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
CD40P25942 MIR769-201ENST00000390225 118 ntBASIC12.74□□□□□ -0.37
CD40P25942 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.74□□□□□ -0.37
CD40P25942 IGHJ2P-201ENST00000454480 60 ntBASIC12.74□□□□□ -0.37
CD40P25942 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.74□□□□□ -0.37
CD40P25942 MARK2P5-201ENST00000507649 634 ntBASIC12.74□□□□□ -0.37
CD40P25942 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.74□□□□□ -0.37
CD40P25942 AC005962.1-201ENST00000584100 773 ntBASIC12.74□□□□□ -0.37
CD40P25942 AC026740.1-201ENST00000607068 791 ntBASIC12.74□□□□□ -0.37
CD40P25942 AC091544.8-201ENST00000619490 361 ntBASIC12.74□□□□□ -0.37
CD40P25942 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.74□□□□□ -0.37
CD40P25942 AC100757.4-201ENST00000626934 759 ntBASIC12.74□□□□□ -0.37
CD40P25942 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.74□□□□□ -0.37
CD40P25942 Z98259.2-201ENST00000641583 609 ntBASIC12.74□□□□□ -0.37
CD40P25942 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.74□□□□□ -0.37
CD40P25942 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
CD40P25942 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CD40P25942 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
CD40P25942 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.74□□□□□ -0.37
CD40P25942 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CD40P25942 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD40P25942 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CD40P25942 AJ011931.1-201ENST00000618749 2492 ntBASIC12.73□□□□□ -0.37
CD40P25942 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.73□□□□□ -0.37
CD40P25942 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 AC104640.1-201ENST00000562617 2109 ntBASIC12.73□□□□□ -0.37
CD40P25942 AC018442.1-201ENST00000421439 2061 ntBASIC12.73□□□□□ -0.37
CD40P25942 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CD40P25942 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CD40P25942 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 MBLAC2-202ENST00000514906 1936 ntBASIC12.73□□□□□ -0.37
CD40P25942 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.73□□□□□ -0.37
CD40P25942 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.73□□□□□ -0.37
CD40P25942 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.73□□□□□ -0.37
CD40P25942 AL157407.1-201ENST00000435784 904 ntBASIC12.73□□□□□ -0.37
CD40P25942 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.73□□□□□ -0.37
CD40P25942 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.73□□□□□ -0.37
CD40P25942 HLA-J-204ENST00000495278 958 ntBASIC12.73□□□□□ -0.37
CD40P25942 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.73□□□□□ -0.37
CD40P25942 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.73□□□□□ -0.37
CD40P25942 SNORD3B-2-202ENST00000571722 791 ntBASIC12.73□□□□□ -0.37
CD40P25942 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.73□□□□□ -0.37
CD40P25942 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CD40P25942 AL645939.5-201ENST00000606834 243 ntBASIC12.73□□□□□ -0.37
CD40P25942 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CD40P25942 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD40P25942 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CD40P25942 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.72□□□□□ -0.37
CD40P25942 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.72□□□□□ -0.37
CD40P25942 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD40P25942 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms