Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFX1P22670 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFX1P22670 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.16■□□□□ 0.18
RFX1P22670 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.16■□□□□ 0.18
RFX1P22670 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.16■□□□□ 0.18
RFX1P22670 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.16■□□□□ 0.18
RFX1P22670 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.16■□□□□ 0.18
RFX1P22670 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX1P22670 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFX1P22670 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RFX1P22670 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.16■□□□□ 0.18
RFX1P22670 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX1P22670 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.16■□□□□ 0.18
RFX1P22670 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFX1P22670 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.16■□□□□ 0.18
RFX1P22670 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX1P22670 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX1P22670 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFX1P22670 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX1P22670 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX1P22670 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX1P22670 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.15■□□□□ 0.18
RFX1P22670 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.15■□□□□ 0.18
RFX1P22670 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX1P22670 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.15■□□□□ 0.18
RFX1P22670 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX1P22670 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RFX1P22670 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX1P22670 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX1P22670 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.15■□□□□ 0.18
RFX1P22670 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX1P22670 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.15■□□□□ 0.18
RFX1P22670 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX1P22670 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX1P22670 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX1P22670 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.15■□□□□ 0.18
RFX1P22670 AC093433.1-201ENST00000458048 571 ntBASIC16.15■□□□□ 0.18
RFX1P22670 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.15■□□□□ 0.18
RFX1P22670 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.15■□□□□ 0.18
RFX1P22670 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.15■□□□□ 0.18
RFX1P22670 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.15■□□□□ 0.18
RFX1P22670 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RFX1P22670 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX1P22670 AL136379.1-201ENST00000623471 2642 ntBASIC16.15■□□□□ 0.18
RFX1P22670 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RFX1P22670 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX1P22670 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RFX1P22670 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFX1P22670 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFX1P22670 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
RFX1P22670 AC003102.2-201ENST00000589195 1469 ntBASIC16.15■□□□□ 0.18
RFX1P22670 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.15■□□□□ 0.18
RFX1P22670 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.15■□□□□ 0.18
RFX1P22670 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RFX1P22670 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.15■□□□□ 0.18
RFX1P22670 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.14■□□□□ 0.18
RFX1P22670 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RFX1P22670 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX1P22670 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX1P22670 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RFX1P22670 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.14■□□□□ 0.17
RFX1P22670 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX1P22670 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX1P22670 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX1P22670 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX1P22670 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.14■□□□□ 0.17
RFX1P22670 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFX1P22670 SALL4P5-201ENST00000419001 1760 ntBASIC16.14■□□□□ 0.17
RFX1P22670 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RFX1P22670 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RFX1P22670 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RFX1P22670 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX1P22670 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX1P22670 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.14■□□□□ 0.17
RFX1P22670 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX1P22670 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFX1P22670 AC079328.1-201ENST00000560358 952 ntBASIC16.14■□□□□ 0.17
RFX1P22670 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC16.14■□□□□ 0.17
RFX1P22670 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.14■□□□□ 0.17
RFX1P22670 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFX1P22670 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.14■□□□□ 0.17
RFX1P22670 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.14■□□□□ 0.17
RFX1P22670 MIR6727-201ENST00000620702 65 ntBASIC16.14■□□□□ 0.17
RFX1P22670 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RFX1P22670 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFX1P22670 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX1P22670 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RFX1P22670 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RFX1P22670 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RFX1P22670 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX1P22670 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX1P22670 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX1P22670 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX1P22670 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX1P22670 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX1P22670 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX1P22670 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFX1P22670 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.14■□□□□ 0.17
RFX1P22670 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.14■□□□□ 0.17
RFX1P22670 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms