Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 OR7E115P-201ENST00000382617 1024 ntBASIC19.9■□□□□ 0.78
ATF3P18847 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC19.9■□□□□ 0.78
ATF3P18847 KRT18P4-201ENST00000422599 1288 ntBASIC19.9■□□□□ 0.78
ATF3P18847 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC19.9■□□□□ 0.78
ATF3P18847 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC19.9■□□□□ 0.78
ATF3P18847 AL021707.6-201ENST00000609212 491 ntBASIC19.9■□□□□ 0.78
ATF3P18847 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC19.9■□□□□ 0.78
ATF3P18847 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF3P18847 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC19.9■□□□□ 0.78
ATF3P18847 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF3P18847 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ATF3P18847 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.9■□□□□ 0.78
ATF3P18847 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC19.9■□□□□ 0.78
ATF3P18847 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ATF3P18847 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF3P18847 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ATF3P18847 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
ATF3P18847 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
ATF3P18847 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.89■□□□□ 0.77
ATF3P18847 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ATF3P18847 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ATF3P18847 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
ATF3P18847 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 AC092570.1-201ENST00000414446 469 ntBASIC19.89■□□□□ 0.77
ATF3P18847 PPP1R2P4-201ENST00000424051 595 ntBASIC19.89■□□□□ 0.77
ATF3P18847 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.89■□□□□ 0.77
ATF3P18847 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC19.89■□□□□ 0.77
ATF3P18847 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC19.89■□□□□ 0.77
ATF3P18847 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC19.89■□□□□ 0.77
ATF3P18847 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.89■□□□□ 0.77
ATF3P18847 AC092612.1-201ENST00000514501 998 ntBASIC19.89■□□□□ 0.77
ATF3P18847 KRT18P37-201ENST00000520711 1282 ntBASIC19.89■□□□□ 0.77
ATF3P18847 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 AL590235.1-201ENST00000564650 861 ntBASIC19.89■□□□□ 0.77
ATF3P18847 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC19.89■□□□□ 0.77
ATF3P18847 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC19.89■□□□□ 0.77
ATF3P18847 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC19.89■□□□□ 0.77
ATF3P18847 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC19.89■□□□□ 0.77
ATF3P18847 AC011462.4-201ENST00000616866 449 ntBASIC19.89■□□□□ 0.77
ATF3P18847 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC19.89■□□□□ 0.77
ATF3P18847 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC19.89■□□□□ 0.77
ATF3P18847 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.89■□□□□ 0.77
ATF3P18847 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
ATF3P18847 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.89■□□□□ 0.77
ATF3P18847 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF3P18847 CYP2T1P-202ENST00000641596 2535 ntBASIC19.89■□□□□ 0.77
ATF3P18847 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF3P18847 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC19.88■□□□□ 0.77
ATF3P18847 AP005117.1-202ENST00000581724 1908 ntBASIC19.88■□□□□ 0.77
ATF3P18847 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF3P18847 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF3P18847 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATF3P18847 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC19.88■□□□□ 0.77
ATF3P18847 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.88■□□□□ 0.77
ATF3P18847 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF3P18847 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ATF3P18847 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF3P18847 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC19.88■□□□□ 0.77
ATF3P18847 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATF3P18847 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC19.88■□□□□ 0.77
ATF3P18847 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC19.88■□□□□ 0.77
ATF3P18847 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC19.88■□□□□ 0.77
ATF3P18847 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC19.88■□□□□ 0.77
ATF3P18847 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC19.88■□□□□ 0.77
ATF3P18847 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC19.88■□□□□ 0.77
ATF3P18847 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms