Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PPP3CBP16298 AL139094.1-201ENST00000405549 1188 ntBASIC13.39□□□□□ -0.27
PPP3CBP16298 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
PPP3CBP16298 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PPP3CBP16298 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.39□□□□□ -0.27
PPP3CBP16298 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
PPP3CBP16298 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PPP3CBP16298 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.39□□□□□ -0.27
PPP3CBP16298 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.39□□□□□ -0.27
PPP3CBP16298 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
PPP3CBP16298 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PPP3CBP16298 AC138951.2-201ENST00000623455 1161 ntBASIC13.39□□□□□ -0.27
PPP3CBP16298 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.39□□□□□ -0.27
PPP3CBP16298 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PPP3CBP16298 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.39□□□□□ -0.27
PPP3CBP16298 AL138709.1-201ENST00000614840 1693 ntBASIC13.39□□□□□ -0.27
PPP3CBP16298 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.39□□□□□ -0.27
PPP3CBP16298 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
PPP3CBP16298 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PPP3CBP16298 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
PPP3CBP16298 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.39□□□□□ -0.27
PPP3CBP16298 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PPP3CBP16298 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
PPP3CBP16298 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PPP3CBP16298 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
PPP3CBP16298 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
PPP3CBP16298 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
PPP3CBP16298 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PPP3CBP16298 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.39□□□□□ -0.27
PPP3CBP16298 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PPP3CBP16298 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PPP3CBP16298 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PPP3CBP16298 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PPP3CBP16298 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
PPP3CBP16298 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.38□□□□□ -0.27
PPP3CBP16298 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
PPP3CBP16298 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.38□□□□□ -0.27
PPP3CBP16298 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.38□□□□□ -0.27
PPP3CBP16298 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
PPP3CBP16298 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.38□□□□□ -0.27
PPP3CBP16298 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
PPP3CBP16298 TPM3P8-201ENST00000330554 643 ntBASIC13.38□□□□□ -0.27
PPP3CBP16298 FAM86MP-201ENST00000340703 885 ntBASIC13.38□□□□□ -0.27
PPP3CBP16298 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.38□□□□□ -0.27
PPP3CBP16298 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
PPP3CBP16298 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.38□□□□□ -0.27
PPP3CBP16298 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.38□□□□□ -0.27
PPP3CBP16298 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.38□□□□□ -0.27
PPP3CBP16298 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
PPP3CBP16298 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 AC127383.1-201ENST00000444697 1800 ntBASIC13.38□□□□□ -0.27
PPP3CBP16298 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 CICP17-201ENST00000418553 2377 ntBASIC13.38□□□□□ -0.27
PPP3CBP16298 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.38□□□□□ -0.27
PPP3CBP16298 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.38□□□□□ -0.27
PPP3CBP16298 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.38□□□□□ -0.27
PPP3CBP16298 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
PPP3CBP16298 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
PPP3CBP16298 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
PPP3CBP16298 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP3CBP16298 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
PPP3CBP16298 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP3CBP16298 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PPP3CBP16298 AC007787.1-201ENST00000588095 1583 ntBASIC13.37□□□□□ -0.27
PPP3CBP16298 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PPP3CBP16298 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP3CBP16298 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.37□□□□□ -0.27
PPP3CBP16298 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.37□□□□□ -0.27
PPP3CBP16298 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PPP3CBP16298 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP3CBP16298 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PPP3CBP16298 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
PPP3CBP16298 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.37□□□□□ -0.27
PPP3CBP16298 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PPP3CBP16298 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP3CBP16298 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP3CBP16298 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
PPP3CBP16298 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP3CBP16298 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.37□□□□□ -0.27
PPP3CBP16298 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PPP3CBP16298 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms