Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
COL6A2P12110 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
COL6A2P12110 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL6A2P12110 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL6A2P12110 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL6A2P12110 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
COL6A2P12110 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL6A2P12110 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL6A2P12110 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.67□□□□□ -0.06
COL6A2P12110 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
COL6A2P12110 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
COL6A2P12110 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL6A2P12110 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL6A2P12110 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
COL6A2P12110 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.67□□□□□ -0.06
COL6A2P12110 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
COL6A2P12110 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.67□□□□□ -0.06
COL6A2P12110 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL6A2P12110 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.67□□□□□ -0.06
COL6A2P12110 AP001063.1-201ENST00000568332 529 ntBASIC14.67□□□□□ -0.06
COL6A2P12110 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.67□□□□□ -0.06
COL6A2P12110 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL6A2P12110 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.67□□□□□ -0.06
COL6A2P12110 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.67□□□□□ -0.06
COL6A2P12110 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.67□□□□□ -0.06
COL6A2P12110 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.67□□□□□ -0.06
COL6A2P12110 AC005252.2-201ENST00000624630 1141 ntBASIC14.67□□□□□ -0.06
COL6A2P12110 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL6A2P12110 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
COL6A2P12110 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL6A2P12110 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL6A2P12110 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
COL6A2P12110 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL6A2P12110 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.67□□□□□ -0.06
COL6A2P12110 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL6A2P12110 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.67□□□□□ -0.06
COL6A2P12110 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.67□□□□□ -0.06
COL6A2P12110 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL6A2P12110 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
COL6A2P12110 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
COL6A2P12110 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL6A2P12110 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.66□□□□□ -0.06
COL6A2P12110 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL6A2P12110 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL6A2P12110 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.66□□□□□ -0.06
COL6A2P12110 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
COL6A2P12110 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL6A2P12110 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL6A2P12110 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.66□□□□□ -0.06
COL6A2P12110 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
COL6A2P12110 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
COL6A2P12110 PTENP1-202ENST00000532280 3996 ntBASIC14.66□□□□□ -0.06
COL6A2P12110 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
COL6A2P12110 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL6A2P12110 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL6A2P12110 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
COL6A2P12110 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.66□□□□□ -0.06
COL6A2P12110 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL6A2P12110 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
COL6A2P12110 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
COL6A2P12110 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.66□□□□□ -0.06
COL6A2P12110 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL6A2P12110 RN7SKP230-201ENST00000365642 335 ntBASIC14.66□□□□□ -0.06
COL6A2P12110 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.66□□□□□ -0.06
COL6A2P12110 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.66□□□□□ -0.06
COL6A2P12110 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.66□□□□□ -0.06
COL6A2P12110 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL6A2P12110 FO681548.1-201ENST00000455617 1132 ntBASIC14.66□□□□□ -0.06
COL6A2P12110 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.66□□□□□ -0.06
COL6A2P12110 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.66□□□□□ -0.06
COL6A2P12110 AC123567.1-201ENST00000548294 1261 ntBASIC14.66□□□□□ -0.06
COL6A2P12110 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL6A2P12110 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.66□□□□□ -0.06
COL6A2P12110 BX088702.1-201ENST00000610784 235 ntBASIC14.66□□□□□ -0.06
COL6A2P12110 AC009118.2-201ENST00000613275 655 ntBASIC14.66□□□□□ -0.06
COL6A2P12110 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.66□□□□□ -0.06
COL6A2P12110 AP001002.3-201ENST00000623482 206 ntBASIC14.66□□□□□ -0.06
COL6A2P12110 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL6A2P12110 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL6A2P12110 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL6A2P12110 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL6A2P12110 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.66□□□□□ -0.06
COL6A2P12110 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.66□□□□□ -0.06
COL6A2P12110 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL6A2P12110 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
COL6A2P12110 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL6A2P12110 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL6A2P12110 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL6A2P12110 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
COL6A2P12110 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
COL6A2P12110 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
COL6A2P12110 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.66□□□□□ -0.06
COL6A2P12110 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
COL6A2P12110 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.66□□□□□ -0.06
COL6A2P12110 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.66□□□□□ -0.06
COL6A2P12110 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL6A2P12110 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
COL6A2P12110 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL6A2P12110 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL6A2P12110 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms