Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC25.02■■□□□ 1.6
TOP2AP11388 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
TOP2AP11388 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TOP2AP11388 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
TOP2AP11388 GSN-215ENST00000545652 2428 ntTSL 2 BASIC25.01■■□□□ 1.59
TOP2AP11388 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TOP2AP11388 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TOP2AP11388 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC25.01■■□□□ 1.59
TOP2AP11388 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC25.01■■□□□ 1.59
TOP2AP11388 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
TOP2AP11388 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC25.01■■□□□ 1.59
TOP2AP11388 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
TOP2AP11388 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC25.01■■□□□ 1.59
TOP2AP11388 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TOP2AP11388 AC022080.1-201ENST00000366255 781 ntBASIC25.01■■□□□ 1.59
TOP2AP11388 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
TOP2AP11388 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TOP2AP11388 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC25.01■■□□□ 1.59
TOP2AP11388 LINP1-201ENST00000417112 917 ntTSL 2 BASIC25.01■■□□□ 1.59
TOP2AP11388 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TOP2AP11388 PSAT1P2-201ENST00000426107 972 ntBASIC25.01■■□□□ 1.59
TOP2AP11388 AL512599.1-201ENST00000430724 685 ntBASIC25.01■■□□□ 1.59
TOP2AP11388 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TOP2AP11388 GDNF-207ENST00000515058 764 ntTSL 5 BASIC25.01■■□□□ 1.59
TOP2AP11388 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC25.01■■□□□ 1.59
TOP2AP11388 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
TOP2AP11388 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC25.01■■□□□ 1.59
TOP2AP11388 AP000769.1-203ENST00000637245 208 ntBASIC25.01■■□□□ 1.59
TOP2AP11388 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TOP2AP11388 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TOP2AP11388 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TOP2AP11388 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TOP2AP11388 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TOP2AP11388 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
TOP2AP11388 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TOP2AP11388 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TOP2AP11388 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
TOP2AP11388 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TOP2AP11388 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC25■■□□□ 1.59
TOP2AP11388 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC25■■□□□ 1.59
TOP2AP11388 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC25■■□□□ 1.59
TOP2AP11388 AC106827.1-201ENST00000366454 431 ntBASIC25■■□□□ 1.59
TOP2AP11388 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC25■■□□□ 1.59
TOP2AP11388 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC25■■□□□ 1.59
TOP2AP11388 AC063952.3-201ENST00000467756 308 ntBASIC25■■□□□ 1.59
TOP2AP11388 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC25■■□□□ 1.59
TOP2AP11388 RN7SL375P-201ENST00000492442 298 ntBASIC25■■□□□ 1.59
TOP2AP11388 AC087203.1-201ENST00000532111 1181 ntBASIC25■■□□□ 1.59
TOP2AP11388 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC25■■□□□ 1.59
TOP2AP11388 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC25■■□□□ 1.59
TOP2AP11388 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TOP2AP11388 COQ4-204ENST00000608951 781 ntTSL 2 BASIC25■■□□□ 1.59
TOP2AP11388 AC026336.4-201ENST00000624565 1050 ntBASIC25■■□□□ 1.59
TOP2AP11388 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC25■■□□□ 1.59
TOP2AP11388 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC25■■□□□ 1.59
TOP2AP11388 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
TOP2AP11388 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TOP2AP11388 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TOP2AP11388 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC24.99■■□□□ 1.59
TOP2AP11388 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TOP2AP11388 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC24.99■■□□□ 1.59
TOP2AP11388 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC24.99■■□□□ 1.59
TOP2AP11388 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC24.99■■□□□ 1.59
TOP2AP11388 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC24.99■■□□□ 1.59
TOP2AP11388 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC24.99■■□□□ 1.59
TOP2AP11388 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC24.99■■□□□ 1.59
TOP2AP11388 AC083801.1-201ENST00000491689 358 ntBASIC24.99■■□□□ 1.59
TOP2AP11388 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC24.99■■□□□ 1.59
TOP2AP11388 FAM86KP-201ENST00000509817 987 ntBASIC24.99■■□□□ 1.59
TOP2AP11388 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC24.99■■□□□ 1.59
TOP2AP11388 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC24.99■■□□□ 1.59
TOP2AP11388 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC24.99■■□□□ 1.59
TOP2AP11388 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TOP2AP11388 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TOP2AP11388 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC24.99■■□□□ 1.59
TOP2AP11388 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TOP2AP11388 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC24.99■■□□□ 1.59
TOP2AP11388 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC24.99■■□□□ 1.59
TOP2AP11388 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC24.99■■□□□ 1.59
TOP2AP11388 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
TOP2AP11388 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TOP2AP11388 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
TOP2AP11388 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC24.98■■□□□ 1.59
TOP2AP11388 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC24.98■■□□□ 1.59
TOP2AP11388 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TOP2AP11388 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TOP2AP11388 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TOP2AP11388 PHB-210ENST00000511832 1509 ntTSL 2 BASIC24.98■■□□□ 1.59
TOP2AP11388 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TOP2AP11388 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC24.98■■□□□ 1.59
TOP2AP11388 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TOP2AP11388 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC24.98■■□□□ 1.59
TOP2AP11388 HNRNPA1P2-207ENST00000432375 960 ntBASIC24.98■■□□□ 1.59
TOP2AP11388 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC24.98■■□□□ 1.59
TOP2AP11388 NME6-208ENST00000435684 599 ntTSL 2 BASIC24.98■■□□□ 1.59
TOP2AP11388 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC24.98■■□□□ 1.59
TOP2AP11388 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC24.98■■□□□ 1.59
TOP2AP11388 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TOP2AP11388 RN7SL147P-201ENST00000487345 298 ntBASIC24.98■■□□□ 1.59
TOP2AP11388 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms