Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CD48P09326 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD48P09326 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD48P09326 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD48P09326 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CD48P09326 KHSRPP1-201ENST00000427983 1768 ntBASIC15.33■□□□□ 0.04
CD48P09326 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CD48P09326 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
CD48P09326 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.33■□□□□ 0.04
CD48P09326 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD48P09326 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CD48P09326 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.33■□□□□ 0.04
CD48P09326 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.33■□□□□ 0.04
CD48P09326 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CD48P09326 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CD48P09326 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD48P09326 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD48P09326 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CD48P09326 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CD48P09326 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CD48P09326 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CD48P09326 AL590440.2-201ENST00000641973 1595 ntBASIC15.32■□□□□ 0.04
CD48P09326 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.32■□□□□ 0.04
CD48P09326 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CD48P09326 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.32■□□□□ 0.04
CD48P09326 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.32■□□□□ 0.04
CD48P09326 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CD48P09326 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 AC004945.1-201ENST00000416738 983 ntBASIC15.32■□□□□ 0.04
CD48P09326 FAM8A4P-201ENST00000435433 1213 ntBASIC15.32■□□□□ 0.04
CD48P09326 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.32■□□□□ 0.04
CD48P09326 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.32■□□□□ 0.04
CD48P09326 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.32■□□□□ 0.04
CD48P09326 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.32■□□□□ 0.04
CD48P09326 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.32■□□□□ 0.04
CD48P09326 AC073413.1-201ENST00000603927 732 ntBASIC15.32■□□□□ 0.04
CD48P09326 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 AC016397.2-201ENST00000624848 1985 ntBASIC15.32■□□□□ 0.04
CD48P09326 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.32■□□□□ 0.04
CD48P09326 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.32■□□□□ 0.04
CD48P09326 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.32■□□□□ 0.04
CD48P09326 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
CD48P09326 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.32■□□□□ 0.04
CD48P09326 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.32■□□□□ 0.04
CD48P09326 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD48P09326 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CD48P09326 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CD48P09326 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.31■□□□□ 0.04
CD48P09326 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CD48P09326 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CD48P09326 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CD48P09326 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
CD48P09326 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CD48P09326 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.31■□□□□ 0.04
CD48P09326 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.31■□□□□ 0.04
CD48P09326 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.31■□□□□ 0.04
CD48P09326 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.31■□□□□ 0.04
CD48P09326 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.31■□□□□ 0.04
CD48P09326 COX20P2-201ENST00000452636 358 ntBASIC15.31■□□□□ 0.04
CD48P09326 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms