Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOA4P06727 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
APOA4P06727 AL035633.1-201ENST00000406139 838 ntBASIC14.9□□□□□ -0.02
APOA4P06727 AL512384.1-201ENST00000406683 331 ntBASIC14.9□□□□□ -0.02
APOA4P06727 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA4P06727 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA4P06727 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.9□□□□□ -0.02
APOA4P06727 AC012441.1-201ENST00000446669 685 ntBASIC14.9□□□□□ -0.02
APOA4P06727 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.9□□□□□ -0.02
APOA4P06727 INE1-201ENST00000456273 945 ntBASIC14.9□□□□□ -0.02
APOA4P06727 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.9□□□□□ -0.02
APOA4P06727 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
APOA4P06727 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
APOA4P06727 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.9□□□□□ -0.02
APOA4P06727 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
APOA4P06727 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.9□□□□□ -0.02
APOA4P06727 AC015936.2-201ENST00000593177 259 ntBASIC14.9□□□□□ -0.02
APOA4P06727 AC105233.6-201ENST00000642093 218 ntBASIC14.9□□□□□ -0.02
APOA4P06727 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOA4P06727 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
APOA4P06727 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
APOA4P06727 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA4P06727 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA4P06727 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOA4P06727 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA4P06727 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.9□□□□□ -0.02
APOA4P06727 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA4P06727 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOA4P06727 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
APOA4P06727 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOA4P06727 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOA4P06727 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOA4P06727 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
APOA4P06727 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.89□□□□□ -0.03
APOA4P06727 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.89□□□□□ -0.03
APOA4P06727 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
APOA4P06727 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.89□□□□□ -0.03
APOA4P06727 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.89□□□□□ -0.03
APOA4P06727 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
APOA4P06727 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.89□□□□□ -0.03
APOA4P06727 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
APOA4P06727 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
APOA4P06727 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
APOA4P06727 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.89□□□□□ -0.03
APOA4P06727 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.89□□□□□ -0.03
APOA4P06727 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
APOA4P06727 AL355864.2-201ENST00000447420 863 ntBASIC14.89□□□□□ -0.03
APOA4P06727 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.89□□□□□ -0.03
APOA4P06727 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.89□□□□□ -0.03
APOA4P06727 DUX4L47-201ENST00000566374 394 ntBASIC14.89□□□□□ -0.03
APOA4P06727 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.89□□□□□ -0.03
APOA4P06727 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.89□□□□□ -0.03
APOA4P06727 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.89□□□□□ -0.03
APOA4P06727 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.89□□□□□ -0.03
APOA4P06727 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 AC011474.4-201ENST00000623523 2076 ntBASIC14.89□□□□□ -0.03
APOA4P06727 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.89□□□□□ -0.03
APOA4P06727 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.89□□□□□ -0.03
APOA4P06727 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
APOA4P06727 AC087386.2-201ENST00000623212 4637 ntBASIC14.89□□□□□ -0.03
APOA4P06727 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.89□□□□□ -0.03
APOA4P06727 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.89□□□□□ -0.03
APOA4P06727 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOA4P06727 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.88□□□□□ -0.03
APOA4P06727 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.88□□□□□ -0.03
APOA4P06727 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.88□□□□□ -0.03
APOA4P06727 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
APOA4P06727 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.88□□□□□ -0.03
APOA4P06727 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms