Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.68■□□□□ 0.42
CHGBP05060 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHGBP05060 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.68■□□□□ 0.42
CHGBP05060 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.68■□□□□ 0.42
CHGBP05060 AC021723.1-201ENST00000486306 515 ntBASIC17.68■□□□□ 0.42
CHGBP05060 HIST2H2BC-201ENST00000498492 580 ntBASIC17.68■□□□□ 0.42
CHGBP05060 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.68■□□□□ 0.42
CHGBP05060 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.68■□□□□ 0.42
CHGBP05060 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CHGBP05060 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.68■□□□□ 0.42
CHGBP05060 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.68■□□□□ 0.42
CHGBP05060 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.68■□□□□ 0.42
CHGBP05060 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.68■□□□□ 0.42
CHGBP05060 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.68■□□□□ 0.42
CHGBP05060 AC008825.2-201ENST00000603374 718 ntBASIC17.68■□□□□ 0.42
CHGBP05060 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.68■□□□□ 0.42
CHGBP05060 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.68■□□□□ 0.42
CHGBP05060 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHGBP05060 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHGBP05060 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHGBP05060 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHGBP05060 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHGBP05060 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHGBP05060 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHGBP05060 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHGBP05060 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHGBP05060 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHGBP05060 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.67■□□□□ 0.42
CHGBP05060 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHGBP05060 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHGBP05060 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.67■□□□□ 0.42
CHGBP05060 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHGBP05060 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.67■□□□□ 0.42
CHGBP05060 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.67■□□□□ 0.42
CHGBP05060 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.67■□□□□ 0.42
CHGBP05060 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.67■□□□□ 0.42
CHGBP05060 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.67■□□□□ 0.42
CHGBP05060 SERPINA13P-202ENST00000478994 924 ntBASIC17.67■□□□□ 0.42
CHGBP05060 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.67■□□□□ 0.42
CHGBP05060 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.67■□□□□ 0.42
CHGBP05060 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.67■□□□□ 0.42
CHGBP05060 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CHGBP05060 AL022328.3-201ENST00000607943 679 ntBASIC17.67■□□□□ 0.42
CHGBP05060 AC068587.8-201ENST00000641239 219 ntBASIC17.67■□□□□ 0.42
CHGBP05060 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHGBP05060 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHGBP05060 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHGBP05060 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHGBP05060 FAM90A7P-201ENST00000382628 1395 ntBASIC17.66■□□□□ 0.42
CHGBP05060 FAM90A23P-201ENST00000400136 1395 ntBASIC17.66■□□□□ 0.42
CHGBP05060 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.66■□□□□ 0.42
CHGBP05060 AC020907.1-201ENST00000616460 1350 ntBASIC17.66■□□□□ 0.42
CHGBP05060 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHGBP05060 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHGBP05060 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHGBP05060 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHGBP05060 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
CHGBP05060 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CHGBP05060 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHGBP05060 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.66■□□□□ 0.42
CHGBP05060 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.66■□□□□ 0.42
CHGBP05060 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHGBP05060 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHGBP05060 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHGBP05060 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHGBP05060 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHGBP05060 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHGBP05060 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.66■□□□□ 0.42
CHGBP05060 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.66■□□□□ 0.42
CHGBP05060 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.66■□□□□ 0.42
CHGBP05060 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHGBP05060 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.66■□□□□ 0.42
CHGBP05060 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.66■□□□□ 0.42
CHGBP05060 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHGBP05060 AC126915.1-201ENST00000522847 1038 ntBASIC17.66■□□□□ 0.42
CHGBP05060 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.66■□□□□ 0.42
CHGBP05060 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.66■□□□□ 0.42
CHGBP05060 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.66■□□□□ 0.42
CHGBP05060 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 162 ms