Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
APOC1P02654 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
APOC1P02654 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
APOC1P02654 CES1P1-201ENST00000421606 1704 ntBASIC13.21□□□□□ -0.3
APOC1P02654 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC1P02654 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC1P02654 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC1P02654 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.21□□□□□ -0.3
APOC1P02654 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC1P02654 AC113367.3-201ENST00000508316 1912 ntBASIC13.21□□□□□ -0.3
APOC1P02654 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
APOC1P02654 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC1P02654 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC1P02654 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC1P02654 KRT8P14-201ENST00000414254 1442 ntBASIC13.21□□□□□ -0.3
APOC1P02654 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC1P02654 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC1P02654 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.21□□□□□ -0.3
APOC1P02654 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC1P02654 AL137783.1-201ENST00000623494 1896 ntBASIC13.21□□□□□ -0.3
APOC1P02654 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
APOC1P02654 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC1P02654 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC1P02654 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.2□□□□□ -0.3
APOC1P02654 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.2□□□□□ -0.3
APOC1P02654 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
APOC1P02654 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
APOC1P02654 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.2□□□□□ -0.3
APOC1P02654 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
APOC1P02654 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.2□□□□□ -0.3
APOC1P02654 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
APOC1P02654 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
APOC1P02654 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.2□□□□□ -0.3
APOC1P02654 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.2□□□□□ -0.3
APOC1P02654 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.2□□□□□ -0.3
APOC1P02654 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.2□□□□□ -0.3
APOC1P02654 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.2□□□□□ -0.3
APOC1P02654 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.2□□□□□ -0.3
APOC1P02654 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
APOC1P02654 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.2□□□□□ -0.3
APOC1P02654 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.2□□□□□ -0.3
APOC1P02654 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.2□□□□□ -0.3
APOC1P02654 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.2□□□□□ -0.3
APOC1P02654 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 AC140479.7-201ENST00000636301 2332 ntBASIC13.2□□□□□ -0.3
APOC1P02654 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.2□□□□□ -0.3
APOC1P02654 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
APOC1P02654 AL157414.3-201ENST00000624276 1954 ntBASIC13.2□□□□□ -0.3
APOC1P02654 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
APOC1P02654 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOC1P02654 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
APOC1P02654 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
APOC1P02654 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
APOC1P02654 AC018529.2-202ENST00000611482 3087 ntBASIC13.19□□□□□ -0.3
APOC1P02654 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
APOC1P02654 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.19□□□□□ -0.3
APOC1P02654 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
APOC1P02654 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms