Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 KRT18P32-201ENST00000424695 1287 ntBASIC12.81□□□□□ -0.36
HLA-DQB1P01920 FAM58DP-201ENST00000428076 619 ntBASIC12.81□□□□□ -0.36
HLA-DQB1P01920 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 CEND1P1-201ENST00000451006 455 ntBASIC12.81□□□□□ -0.36
HLA-DQB1P01920 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 ALG1L5P-201ENST00000482043 771 ntBASIC12.81□□□□□ -0.36
HLA-DQB1P01920 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 KRT18P58-201ENST00000527480 1120 ntBASIC12.81□□□□□ -0.36
HLA-DQB1P01920 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 AC026150.2-201ENST00000564693 1156 ntBASIC12.81□□□□□ -0.36
HLA-DQB1P01920 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 LINC01115-203ENST00000606068 577 ntBASIC12.81□□□□□ -0.36
HLA-DQB1P01920 AC003101.2-201ENST00000612557 442 ntBASIC12.81□□□□□ -0.36
HLA-DQB1P01920 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 MARK2P9-201ENST00000430958 1727 ntBASIC12.81□□□□□ -0.36
HLA-DQB1P01920 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.81□□□□□ -0.36
HLA-DQB1P01920 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 AL031719.1-201ENST00000623365 2587 ntBASIC12.8□□□□□ -0.36
HLA-DQB1P01920 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 AL391647.1-201ENST00000395664 511 ntBASIC12.8□□□□□ -0.36
HLA-DQB1P01920 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 AL079307.3-201ENST00000556114 283 ntBASIC12.8□□□□□ -0.36
HLA-DQB1P01920 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 AC092364.2-202ENST00000597012 1073 ntBASIC12.8□□□□□ -0.36
HLA-DQB1P01920 AC000095.1-201ENST00000603208 874 ntBASIC12.8□□□□□ -0.36
HLA-DQB1P01920 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 AL513210.1-201ENST00000629608 234 ntBASIC12.8□□□□□ -0.36
HLA-DQB1P01920 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms