Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.25□□□□□ -0.29
CNOT4O95628 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
CNOT4O95628 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CNOT4O95628 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CNOT4O95628 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CNOT4O95628 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
CNOT4O95628 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.24□□□□□ -0.29
CNOT4O95628 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.24□□□□□ -0.29
CNOT4O95628 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.24□□□□□ -0.29
CNOT4O95628 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 AC092506.1-202ENST00000401022 528 ntBASIC13.24□□□□□ -0.29
CNOT4O95628 AL136309.1-201ENST00000403917 691 ntBASIC13.24□□□□□ -0.29
CNOT4O95628 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 CNN2P10-201ENST00000443067 918 ntBASIC13.24□□□□□ -0.29
CNOT4O95628 HOMER2P2-201ENST00000451621 847 ntBASIC13.24□□□□□ -0.29
CNOT4O95628 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 RPL13AP20-201ENST00000459725 609 ntBASIC13.24□□□□□ -0.29
CNOT4O95628 COX5BP1-201ENST00000507622 393 ntBASIC13.24□□□□□ -0.29
CNOT4O95628 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.24□□□□□ -0.29
CNOT4O95628 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.24□□□□□ -0.29
CNOT4O95628 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.24□□□□□ -0.29
CNOT4O95628 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.24□□□□□ -0.29
CNOT4O95628 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.24□□□□□ -0.29
CNOT4O95628 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.24□□□□□ -0.29
CNOT4O95628 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.24□□□□□ -0.29
CNOT4O95628 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CNOT4O95628 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CNOT4O95628 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CNOT4O95628 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.23□□□□□ -0.29
CNOT4O95628 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.23□□□□□ -0.29
CNOT4O95628 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.23□□□□□ -0.29
CNOT4O95628 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CNOT4O95628 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.23□□□□□ -0.29
CNOT4O95628 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.23□□□□□ -0.29
CNOT4O95628 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.23□□□□□ -0.29
CNOT4O95628 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CNOT4O95628 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.23□□□□□ -0.29
CNOT4O95628 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.23□□□□□ -0.29
CNOT4O95628 ALG3P1-201ENST00000508806 1114 ntBASIC13.23□□□□□ -0.29
CNOT4O95628 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.23□□□□□ -0.29
CNOT4O95628 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.23□□□□□ -0.29
CNOT4O95628 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.23□□□□□ -0.29
CNOT4O95628 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CNOT4O95628 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.23□□□□□ -0.29
CNOT4O95628 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.23□□□□□ -0.29
CNOT4O95628 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CNOT4O95628 AC138696.2-201ENST00000607376 223 ntBASIC13.23□□□□□ -0.29
CNOT4O95628 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms