Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 AC015911.4-201ENST00000588022 1070 ntBASIC15.02■□□□□ -0
CDH16O75309 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.02■□□□□ -0
CDH16O75309 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.02■□□□□ -0
CDH16O75309 AL138828.2-201ENST00000615812 383 ntBASIC15.02■□□□□ -0
CDH16O75309 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CDH16O75309 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.02□□□□□ -0.01
CDH16O75309 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH16O75309 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH16O75309 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
CDH16O75309 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CDH16O75309 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CDH16O75309 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CDH16O75309 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.02□□□□□ -0.01
CDH16O75309 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH16O75309 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH16O75309 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH16O75309 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CDH16O75309 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.02□□□□□ -0.01
CDH16O75309 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CDH16O75309 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH16O75309 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH16O75309 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH16O75309 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH16O75309 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH16O75309 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.02□□□□□ -0.01
CDH16O75309 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH16O75309 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH16O75309 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH16O75309 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH16O75309 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH16O75309 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDH16O75309 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH16O75309 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CDH16O75309 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
CDH16O75309 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH16O75309 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH16O75309 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH16O75309 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH16O75309 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH16O75309 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH16O75309 AC011498.7-201ENST00000624986 2027 ntBASIC15.01□□□□□ -0.01
CDH16O75309 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH16O75309 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH16O75309 TLE1P1-201ENST00000422965 589 ntBASIC15.01□□□□□ -0.01
CDH16O75309 METTL21AP1-201ENST00000438852 635 ntBASIC15.01□□□□□ -0.01
CDH16O75309 CNN2P2-201ENST00000443536 909 ntBASIC15.01□□□□□ -0.01
CDH16O75309 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH16O75309 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.01□□□□□ -0.01
CDH16O75309 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.01□□□□□ -0.01
CDH16O75309 CNN2P3-201ENST00000450201 906 ntBASIC15.01□□□□□ -0.01
CDH16O75309 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.01□□□□□ -0.01
CDH16O75309 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CDH16O75309 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH16O75309 ZNF890P-202ENST00000530367 1156 ntBASIC15.01□□□□□ -0.01
CDH16O75309 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDH16O75309 AC107373.2-201ENST00000607735 490 ntBASIC15.01□□□□□ -0.01
CDH16O75309 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.01□□□□□ -0.01
CDH16O75309 AL136317.3-201ENST00000618497 906 ntBASIC15.01□□□□□ -0.01
CDH16O75309 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH16O75309 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CDH16O75309 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDH16O75309 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CDH16O75309 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDH16O75309 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH16O75309 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH16O75309 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH16O75309 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH16O75309 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CDH16O75309 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH16O75309 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH16O75309 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH16O75309 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH16O75309 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH16O75309 SALL4P5-201ENST00000419001 1760 ntBASIC15.01□□□□□ -0.01
CDH16O75309 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH16O75309 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH16O75309 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH16O75309 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15□□□□□ -0.01
CDH16O75309 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CDH16O75309 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15□□□□□ -0.01
CDH16O75309 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
CDH16O75309 AL136172.1-201ENST00000598590 1394 ntBASIC15□□□□□ -0.01
CDH16O75309 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH16O75309 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH16O75309 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH16O75309 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH16O75309 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15□□□□□ -0.01
CDH16O75309 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH16O75309 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH16O75309 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH16O75309 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH16O75309 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15□□□□□ -0.01
CDH16O75309 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15□□□□□ -0.01
CDH16O75309 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH16O75309 AC020658.7-201ENST00000624274 2442 ntBASIC15□□□□□ -0.01
CDH16O75309 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH16O75309 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH16O75309 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDH16O75309 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15□□□□□ -0.01
CDH16O75309 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms