Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC147876.1-201ENST00000504408 322 ntBASIC20.17■□□□□ 0.82
NPHP4O75161 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC20.17■□□□□ 0.82
NPHP4O75161 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC20.17■□□□□ 0.82
NPHP4O75161 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC20.17■□□□□ 0.82
NPHP4O75161 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC20.17■□□□□ 0.82
NPHP4O75161 AC010531.8-201ENST00000623341 685 ntBASIC20.17■□□□□ 0.82
NPHP4O75161 BX322534.1-201ENST00000635574 241 ntBASIC20.17■□□□□ 0.82
NPHP4O75161 AC215524.1-201ENST00000635696 241 ntBASIC20.17■□□□□ 0.82
NPHP4O75161 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.17■□□□□ 0.82
NPHP4O75161 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC20.17■□□□□ 0.82
NPHP4O75161 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPHP4O75161 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.17■□□□□ 0.82
NPHP4O75161 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC20.17■□□□□ 0.82
NPHP4O75161 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC20.17■□□□□ 0.82
NPHP4O75161 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPHP4O75161 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPHP4O75161 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC20.16■□□□□ 0.82
NPHP4O75161 AC020931.1-201ENST00000589622 1346 ntBASIC20.16■□□□□ 0.82
NPHP4O75161 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC20.16■□□□□ 0.82
NPHP4O75161 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPHP4O75161 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC20.16■□□□□ 0.82
NPHP4O75161 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPHP4O75161 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPHP4O75161 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC20.16■□□□□ 0.82
NPHP4O75161 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPHP4O75161 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPHP4O75161 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
NPHP4O75161 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPHP4O75161 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPHP4O75161 MIR611-201ENST00000384869 67 ntBASIC20.16■□□□□ 0.82
NPHP4O75161 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
NPHP4O75161 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC20.16■□□□□ 0.82
NPHP4O75161 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC20.16■□□□□ 0.82
NPHP4O75161 NALT1-202ENST00000450304 437 ntTSL 3 BASIC20.16■□□□□ 0.82
NPHP4O75161 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC20.16■□□□□ 0.82
NPHP4O75161 ALG1L15P-201ENST00000482834 794 ntBASIC20.16■□□□□ 0.82
NPHP4O75161 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC20.16■□□□□ 0.82
NPHP4O75161 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC20.16■□□□□ 0.82
NPHP4O75161 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPHP4O75161 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPHP4O75161 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPHP4O75161 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC20.16■□□□□ 0.82
NPHP4O75161 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPHP4O75161 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.16■□□□□ 0.82
NPHP4O75161 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPHP4O75161 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPHP4O75161 BID-213ENST00000615414 2236 ntTSL 5 BASIC20.15■□□□□ 0.82
NPHP4O75161 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPHP4O75161 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NPHP4O75161 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPHP4O75161 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
NPHP4O75161 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
NPHP4O75161 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NPHP4O75161 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NPHP4O75161 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NPHP4O75161 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPHP4O75161 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPHP4O75161 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPHP4O75161 ABCD1P4-201ENST00000399687 604 ntBASIC20.15■□□□□ 0.82
NPHP4O75161 DKKL1P1-201ENST00000400550 698 ntBASIC20.15■□□□□ 0.82
NPHP4O75161 AL773545.2-201ENST00000442149 472 ntBASIC20.15■□□□□ 0.82
NPHP4O75161 CDK4P1-201ENST00000454213 828 ntBASIC20.15■□□□□ 0.82
NPHP4O75161 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC20.15■□□□□ 0.82
NPHP4O75161 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC20.15■□□□□ 0.82
NPHP4O75161 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC20.15■□□□□ 0.82
NPHP4O75161 LY6E-215ENST00000523847 427 ntTSL 3 BASIC20.15■□□□□ 0.82
NPHP4O75161 INO80E-209ENST00000567254 625 ntTSL 2 BASIC20.15■□□□□ 0.82
NPHP4O75161 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC20.15■□□□□ 0.82
NPHP4O75161 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
NPHP4O75161 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.15■□□□□ 0.82
NPHP4O75161 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
NPHP4O75161 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC20.15■□□□□ 0.82
NPHP4O75161 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
NPHP4O75161 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPHP4O75161 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPHP4O75161 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NPHP4O75161 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPHP4O75161 AL118508.1-201ENST00000613502 2345 ntBASIC20.15■□□□□ 0.82
NPHP4O75161 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.15■□□□□ 0.82
NPHP4O75161 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.15■□□□□ 0.82
NPHP4O75161 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPHP4O75161 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NPHP4O75161 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC20.14■□□□□ 0.82
NPHP4O75161 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
NPHP4O75161 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
NPHP4O75161 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
NPHP4O75161 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC20.14■□□□□ 0.82
NPHP4O75161 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
NPHP4O75161 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPHP4O75161 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
NPHP4O75161 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC20.14■□□□□ 0.81
NPHP4O75161 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC20.14■□□□□ 0.81
NPHP4O75161 MED15P3-201ENST00000413613 326 ntBASIC20.14■□□□□ 0.81
NPHP4O75161 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC20.14■□□□□ 0.81
NPHP4O75161 AC053503.3-201ENST00000448375 114 ntBASIC20.14■□□□□ 0.81
NPHP4O75161 HNRNPA3P6-201ENST00000472163 1006 ntBASIC20.14■□□□□ 0.81
NPHP4O75161 AC011431.1-201ENST00000512971 230 ntBASIC20.14■□□□□ 0.81
NPHP4O75161 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC20.14■□□□□ 0.81
NPHP4O75161 AP000920.1-201ENST00000531824 344 ntBASIC20.14■□□□□ 0.81
NPHP4O75161 BAK1P2-201ENST00000532665 631 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms