Protein–RNA interactions for Protein: O60682

MSC, Musculin, humanhuman

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSCO60682 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.47■□□□□ 0.23
MSCO60682 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.47■□□□□ 0.23
MSCO60682 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.47■□□□□ 0.23
MSCO60682 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.47■□□□□ 0.23
MSCO60682 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.47■□□□□ 0.23
MSCO60682 AL354861.1-201ENST00000445213 355 ntBASIC16.47■□□□□ 0.23
MSCO60682 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 PPOX-204ENST00000462866 473 ntTSL 5 BASIC16.47■□□□□ 0.23
MSCO60682 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.47■□□□□ 0.23
MSCO60682 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.47■□□□□ 0.23
MSCO60682 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.47■□□□□ 0.23
MSCO60682 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.47■□□□□ 0.23
MSCO60682 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.47■□□□□ 0.23
MSCO60682 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MSCO60682 AC005618.3-201ENST00000624928 458 ntBASIC16.47■□□□□ 0.23
MSCO60682 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.47■□□□□ 0.23
MSCO60682 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
MSCO60682 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.47■□□□□ 0.23
MSCO60682 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
MSCO60682 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 AC046158.3-201ENST00000624947 2558 ntBASIC16.47■□□□□ 0.23
MSCO60682 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
MSCO60682 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.47■□□□□ 0.23
MSCO60682 MARK2P16-201ENST00000605714 1723 ntBASIC16.47■□□□□ 0.23
MSCO60682 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
MSCO60682 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MSCO60682 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MSCO60682 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MSCO60682 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
MSCO60682 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSCO60682 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MSCO60682 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.46■□□□□ 0.23
MSCO60682 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MSCO60682 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MSCO60682 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSCO60682 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSCO60682 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.46■□□□□ 0.23
MSCO60682 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.46■□□□□ 0.23
MSCO60682 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.46■□□□□ 0.23
MSCO60682 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
MSCO60682 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.46■□□□□ 0.23
MSCO60682 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.46■□□□□ 0.23
MSCO60682 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSCO60682 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.46■□□□□ 0.23
MSCO60682 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.46■□□□□ 0.23
MSCO60682 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.46■□□□□ 0.23
MSCO60682 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
MSCO60682 AC138466.4-201ENST00000623965 852 ntBASIC16.46■□□□□ 0.23
MSCO60682 AC138466.5-201ENST00000624002 808 ntBASIC16.46■□□□□ 0.23
MSCO60682 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.46■□□□□ 0.23
MSCO60682 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSCO60682 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSCO60682 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSCO60682 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSCO60682 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSCO60682 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
MSCO60682 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.46■□□□□ 0.23
MSCO60682 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSCO60682 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MSCO60682 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.46■□□□□ 0.23
MSCO60682 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.46■□□□□ 0.22
MSCO60682 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
MSCO60682 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
MSCO60682 LINC00528-201ENST00000600723 2160 ntBASIC16.45■□□□□ 0.22
MSCO60682 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MSCO60682 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MSCO60682 LINC01815-202ENST00000641468 1409 ntBASIC16.45■□□□□ 0.22
MSCO60682 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
MSCO60682 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.45■□□□□ 0.22
MSCO60682 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MSCO60682 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MSCO60682 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MSCO60682 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MSCO60682 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MSCO60682 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MSCO60682 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
MSCO60682 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MSCO60682 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.45■□□□□ 0.22
MSCO60682 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MSCO60682 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.45■□□□□ 0.22
MSCO60682 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.45■□□□□ 0.22
MSCO60682 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.45■□□□□ 0.22
MSCO60682 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms