Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC28A2O43868 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC28A2O43868 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SLC28A2O43868 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
SLC28A2O43868 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC28A2O43868 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC28A2O43868 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
SLC28A2O43868 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC28A2O43868 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SLC28A2O43868 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC28A2O43868 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.37□□□□□ -0.11
SLC28A2O43868 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC28A2O43868 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SLC28A2O43868 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.37□□□□□ -0.11
SLC28A2O43868 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SLC28A2O43868 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SLC28A2O43868 MIR769-201ENST00000390225 118 ntBASIC14.37□□□□□ -0.11
SLC28A2O43868 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SLC28A2O43868 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC28A2O43868 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SLC28A2O43868 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC28A2O43868 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC28A2O43868 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC28A2O43868 FTLP10-202ENST00000505798 471 ntBASIC14.37□□□□□ -0.11
SLC28A2O43868 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 AC097724.1-201ENST00000609581 426 ntBASIC14.37□□□□□ -0.11
SLC28A2O43868 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
SLC28A2O43868 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.37□□□□□ -0.11
SLC28A2O43868 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 CICP14-201ENST00000629111 2732 ntBASIC14.37□□□□□ -0.11
SLC28A2O43868 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC28A2O43868 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.37□□□□□ -0.11
SLC28A2O43868 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 REXO1L4P-201ENST00000605109 1937 ntBASIC14.37□□□□□ -0.11
SLC28A2O43868 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC28A2O43868 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SLC28A2O43868 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SLC28A2O43868 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SLC28A2O43868 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC28A2O43868 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
SLC28A2O43868 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 AC023908.3-201ENST00000564211 3047 ntBASIC14.36□□□□□ -0.11
SLC28A2O43868 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 CNN2P8-201ENST00000421872 913 ntBASIC14.36□□□□□ -0.11
SLC28A2O43868 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC28A2O43868 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC28A2O43868 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.36□□□□□ -0.11
SLC28A2O43868 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC28A2O43868 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.36□□□□□ -0.11
SLC28A2O43868 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC28A2O43868 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC28A2O43868 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.36□□□□□ -0.11
SLC28A2O43868 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC28A2O43868 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SLC28A2O43868 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SLC28A2O43868 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC28A2O43868 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC28A2O43868 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC28A2O43868 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms