Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 MIR1202-201ENST00000408529 83 ntBASIC13.21□□□□□ -0.29
TRAF3IP2O43734 AC112492.5-201ENST00000421897 457 ntBASIC13.21□□□□□ -0.29
TRAF3IP2O43734 AC234783.1-201ENST00000441761 496 ntBASIC13.21□□□□□ -0.29
TRAF3IP2O43734 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 COX5BP1-201ENST00000507622 393 ntBASIC13.21□□□□□ -0.29
TRAF3IP2O43734 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.21□□□□□ -0.29
TRAF3IP2O43734 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAF3IP2O43734 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRAF3IP2O43734 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAF3IP2O43734 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
TRAF3IP2O43734 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRAF3IP2O43734 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 RAB43P1-201ENST00000561790 589 ntBASIC13.2□□□□□ -0.3
TRAF3IP2O43734 C2orf69P2-201ENST00000562032 1123 ntBASIC13.2□□□□□ -0.3
TRAF3IP2O43734 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 MIR4683-201ENST00000579659 81 ntBASIC13.2□□□□□ -0.3
TRAF3IP2O43734 AL512343.1-201ENST00000605837 169 ntBASIC13.2□□□□□ -0.3
TRAF3IP2O43734 AC002472.3-201ENST00000640124 621 ntBASIC13.2□□□□□ -0.3
TRAF3IP2O43734 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF3IP2O43734 AL590440.2-201ENST00000641973 1595 ntBASIC13.2□□□□□ -0.3
TRAF3IP2O43734 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 MYADML-201ENST00000474610 2147 ntBASIC13.19□□□□□ -0.3
TRAF3IP2O43734 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 AHCYP2-201ENST00000430630 1300 ntBASIC13.19□□□□□ -0.3
TRAF3IP2O43734 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms