Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 AP001582.1-201ENST00000525856 295 ntBASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 AC023310.1-201ENST00000554836 735 ntBASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.12□□□□□ -0.15
PCDHGB6Q9Y5F9 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 HSPA7-201ENST00000445535 1927 ntBASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 BX640514.1-201ENST00000583223 1918 ntBASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 FAM86MP-201ENST00000340703 885 ntBASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 CD8B2-202ENST00000417670 633 ntBASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
PCDHGB6Q9Y5F9 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 AL133338.1-201ENST00000565695 1517 ntBASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 AC006001.1-201ENST00000325130 474 ntBASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCDHGB6Q9Y5F9 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms