Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 AC003102.2-201ENST00000589195 1469 ntBASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 TPT1P11-201ENST00000458482 498 ntBASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 RNA5SP486-201ENST00000515961 83 ntBASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 SCARNA20.5-201ENST00000516991 142 ntBASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 AC079328.1-201ENST00000560358 952 ntBASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 EEF1DP1-201ENST00000585891 896 ntBASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 INTS4P1-203ENST00000641008 3683 ntBASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHB1Q9Y5F3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHB1Q9Y5F3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.83□□□□□ -0.03
PCDHB1Q9Y5F3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHB1Q9Y5F3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHB1Q9Y5F3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHB1Q9Y5F3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHB1Q9Y5F3 AC138028.6-201ENST00000616106 1482 ntBASIC14.83□□□□□ -0.03
PCDHB1Q9Y5F3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
PCDHB1Q9Y5F3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHB1Q9Y5F3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 AC004898.1-201ENST00000451057 766 ntBASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 HIST2H2BC-201ENST00000498492 580 ntBASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 AL096828.3-201ENST00000615354 462 ntBASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 ENPP7P14-201ENST00000621765 1040 ntBASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB1Q9Y5F3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms