Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 AC006538.3-201ENST00000612495 578 ntBASIC13.98□□□□□ -0.17
IFT52Q9Y366 AC009118.2-201ENST00000613275 655 ntBASIC13.98□□□□□ -0.17
IFT52Q9Y366 AC023090.2-201ENST00000625182 2110 ntBASIC13.98□□□□□ -0.17
IFT52Q9Y366 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 KRT8P14-201ENST00000414254 1442 ntBASIC13.98□□□□□ -0.17
IFT52Q9Y366 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 C1QBPP1-201ENST00000400117 770 ntBASIC13.97□□□□□ -0.17
IFT52Q9Y366 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 AC114812.1-204ENST00000449669 728 ntBASIC13.97□□□□□ -0.17
IFT52Q9Y366 TPT1P11-201ENST00000458482 498 ntBASIC13.97□□□□□ -0.17
IFT52Q9Y366 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 AC022616.1-201ENST00000518688 554 ntBASIC13.97□□□□□ -0.17
IFT52Q9Y366 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 AC005498.2-205ENST00000593218 784 ntBASIC13.97□□□□□ -0.17
IFT52Q9Y366 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 AC093726.1-201ENST00000608064 963 ntBASIC13.97□□□□□ -0.17
IFT52Q9Y366 AC004790.1-201ENST00000612686 536 ntBASIC13.97□□□□□ -0.17
IFT52Q9Y366 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
IFT52Q9Y366 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IFT52Q9Y366 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 SLC7A15P-201ENST00000424028 1363 ntBASIC13.96□□□□□ -0.17
IFT52Q9Y366 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms