Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 KRT8P35-201ENST00000483942 1338 ntBASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 AL360270.3-201ENST00000609118 1348 ntBASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 MIR1202-201ENST00000408529 83 ntBASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 ACTG1P17-201ENST00000558391 1119 ntBASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.23■□□□□ 0.03
FNDC3AQ9Y2H6 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms