Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.57■□□□□ 0.24
COL20A1Q9P218 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.57■□□□□ 0.24
COL20A1Q9P218 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL20A1Q9P218 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.57■□□□□ 0.24
COL20A1Q9P218 AC026803.1-201ENST00000569130 274 ntBASIC16.57■□□□□ 0.24
COL20A1Q9P218 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.57■□□□□ 0.24
COL20A1Q9P218 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.57■□□□□ 0.24
COL20A1Q9P218 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL20A1Q9P218 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.57■□□□□ 0.24
COL20A1Q9P218 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL20A1Q9P218 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL20A1Q9P218 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL20A1Q9P218 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL20A1Q9P218 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL20A1Q9P218 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL20A1Q9P218 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.57■□□□□ 0.24
COL20A1Q9P218 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL20A1Q9P218 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL20A1Q9P218 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.57■□□□□ 0.24
COL20A1Q9P218 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.57■□□□□ 0.24
COL20A1Q9P218 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL20A1Q9P218 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL20A1Q9P218 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL20A1Q9P218 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
COL20A1Q9P218 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.56■□□□□ 0.24
COL20A1Q9P218 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
COL20A1Q9P218 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.56■□□□□ 0.24
COL20A1Q9P218 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 AHCYP4-201ENST00000419201 1315 ntBASIC16.56■□□□□ 0.24
COL20A1Q9P218 FRMPD2B-201ENST00000431305 1347 ntBASIC16.56■□□□□ 0.24
COL20A1Q9P218 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 RNA5SP359-201ENST00000364838 113 ntBASIC16.56■□□□□ 0.24
COL20A1Q9P218 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 TSPY25P-201ENST00000429463 745 ntBASIC16.56■□□□□ 0.24
COL20A1Q9P218 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.56■□□□□ 0.24
COL20A1Q9P218 MYADML-201ENST00000474610 2147 ntBASIC16.56■□□□□ 0.24
COL20A1Q9P218 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
COL20A1Q9P218 AC027237.1-201ENST00000560942 655 ntBASIC16.56■□□□□ 0.24
COL20A1Q9P218 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.56■□□□□ 0.24
COL20A1Q9P218 AC124068.2-201ENST00000569473 1109 ntBASIC16.56■□□□□ 0.24
COL20A1Q9P218 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.56■□□□□ 0.24
COL20A1Q9P218 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
COL20A1Q9P218 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.56■□□□□ 0.24
COL20A1Q9P218 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.56■□□□□ 0.24
COL20A1Q9P218 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.56■□□□□ 0.24
COL20A1Q9P218 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.56■□□□□ 0.24
COL20A1Q9P218 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.56■□□□□ 0.24
COL20A1Q9P218 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
COL20A1Q9P218 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL20A1Q9P218 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
COL20A1Q9P218 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.55■□□□□ 0.24
COL20A1Q9P218 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.55■□□□□ 0.24
COL20A1Q9P218 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.55■□□□□ 0.24
COL20A1Q9P218 TBC1D3J-201ENST00000620719 1426 ntBASIC16.55■□□□□ 0.24
COL20A1Q9P218 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 AC215219.1-201ENST00000400706 1817 ntBASIC16.55■□□□□ 0.24
COL20A1Q9P218 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
COL20A1Q9P218 AC092506.1-202ENST00000401022 528 ntBASIC16.55■□□□□ 0.24
COL20A1Q9P218 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL20A1Q9P218 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.55■□□□□ 0.24
COL20A1Q9P218 IGLV3-15-201ENST00000518356 244 ntBASIC16.55■□□□□ 0.24
COL20A1Q9P218 POU5F1P2-201ENST00000521750 823 ntBASIC16.55■□□□□ 0.24
COL20A1Q9P218 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.55■□□□□ 0.24
COL20A1Q9P218 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.55■□□□□ 0.24
COL20A1Q9P218 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.55■□□□□ 0.24
COL20A1Q9P218 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms